BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035861
         (266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indi...    71   1e-10
ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    70   2e-10
ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    70   2e-10
ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago tr...    70   2e-10
ref|XP_003636005.1| Helicase-like protein [Medicago truncatula] ...    69   3e-10

>gb|EEC68598.1| hypothetical protein OsI_36954 [Oryza sativa Indica Group]
          Length = 909

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
 Frame = +2

Query: 2   DDDLANGRNGVYTYRAKGAIYHRIGGLLPRPGDR-PRYLQMYIYDTDHELEYCLTESKIL 178
           D    NG +GVYT+RA+G IYHRI  L  +PGD  PR+LQ+Y YDTD +L +    S  L
Sbjct: 341 DQRYCNGSSGVYTFRAQGQIYHRIDQL--QPGDNGPRHLQLYFYDTDADLSHRSRRSPDL 398

Query: 179 DRQVLAILKKVLDSNNKFVHIFREI 253
           D  V+  +  +L+ +N +VH FR++
Sbjct: 399 DINVVRNILGILE-HNPYVHTFRQM 422


>ref|XP_003612653.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355513988|gb|AES95611.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1427

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
 Frame = +2

Query: 5   DDLANGRNGVYTYRAKGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHELEYCLTE------ 166
           D+  N R G Y Y+  G  YHRIGGL+P  G +P++ Q+Y++DT++E++  L+       
Sbjct: 91  DNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQLYVHDTENEIQNRLSSLNGGKT 150

Query: 167 SKILDRQVLAILKKVLDSNNKFVHIFR 247
           ++ LD  ++  LK +LD NN    +FR
Sbjct: 151 ARDLDADIVRRLKDMLDMNNSVAKLFR 177


>ref|XP_003609124.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355510179|gb|AES91321.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
 Frame = +2

Query: 5   DDLANGRNGVYTYRAKGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHELEYCLTE------ 166
           D+  N R G Y Y+  G  YHRIGGL+P  G +P++ Q+Y++DT++E++  L+       
Sbjct: 91  DNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQLYVHDTENEIQNRLSSLNGGKT 150

Query: 167 SKILDRQVLAILKKVLDSNNKFVHIFR 247
           ++ LD  ++  LK +LD NN    +FR
Sbjct: 151 ARDLDADIVRRLKDMLDMNNSVAKLFR 177


>ref|XP_003606913.1| ATP-dependent DNA helicase PIF1 [Medicago truncatula]
           gi|355507968|gb|AES89110.1| ATP-dependent DNA helicase
           PIF1 [Medicago truncatula]
          Length = 1558

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/87 (37%), Positives = 53/87 (60%), Gaps = 6/87 (6%)
 Frame = +2

Query: 5   DDLANGRNGVYTYRAKGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHELEYCLTE------ 166
           D+  N R G Y Y+  G  YHRIGGL+P  G +P++ Q+Y++DT++E++  L+       
Sbjct: 91  DNTVNLRPGPYVYKISGQNYHRIGGLIPGQGKQPKFSQLYVHDTENEIQNRLSSLNGGKT 150

Query: 167 SKILDRQVLAILKKVLDSNNKFVHIFR 247
           ++ LD  ++  LK +LD NN    +FR
Sbjct: 151 ARDLDADIVRRLKDMLDMNNSVAKLFR 177


>ref|XP_003636005.1| Helicase-like protein [Medicago truncatula]
           gi|355501940|gb|AES83143.1| Helicase-like protein
           [Medicago truncatula]
          Length = 1844

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +2

Query: 5   DDLANGRNGVYTYRAKGAIYHRIGGLLPRPGDRPRYLQMYIYDTDHELEYCLTE---SKI 175
           D   N   G  T R +G   HR+G LLP PGD P+Y Q+YI+DTD+E+   +     +K 
Sbjct: 529 DTKINNGKGPPTLRMQGQTCHRVGSLLPLPGDSPKYAQLYIFDTDNEISNRMNSFRTNKD 588

Query: 176 LDRQVLAILKKVLDSNNKFVHIFR 247
           +D +++  LK +LD NN    +FR
Sbjct: 589 IDEEIVKKLKLMLDQNNVHAKVFR 612