BLASTX nr result

ID: Coptis25_contig00035859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035859
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328344.1| autoinhibited calcium ATPase [Populus tricho...    56   3e-06

>ref|XP_002328344.1| autoinhibited calcium ATPase [Populus trichocarpa]
           gi|222838059|gb|EEE76424.1| autoinhibited calcium ATPase
           [Populus trichocarpa]
          Length = 966

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 35/91 (38%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
 Frame = +3

Query: 117 TTIYAVRVLFSLYQEIVARKNQPFT*FLHTQSYAAIDIQLNNDAKNQVILSNVDHKSIIH 296
           T IY  R+L SL +  +  + +     L + SY A+D++ +   +N V L NVD +++  
Sbjct: 4   TAIYFTRLLGSLSKTALESQTK----ILRSLSYVALDVRDDTPRENLVSLINVDQRTLAD 59

Query: 297 FVK*KNLEDLQQFGSVHQVAAA-LQTNIGNG 386
            VK KNLE L+Q G V QVA   L+T++ NG
Sbjct: 60  MVKGKNLESLKQLGGVTQVATTILETDVKNG 90


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