BLASTX nr result

ID: Coptis25_contig00035850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035850
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223...    73   2e-11
emb|CBI20794.3| unnamed protein product [Vitis vinifera]               72   4e-11
ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [...    72   4e-11

>ref|XP_002325822.1| predicted protein [Populus trichocarpa] gi|222862697|gb|EEF00204.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 38/49 (77%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
 Frame = +3

Query: 168 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLE 311
           MNDLMTKSF+SYVDLKKEAMKDLEAGPD+ +EM NA+N ++ NL LFLE
Sbjct: 1   MNDLMTKSFMSYVDLKKEAMKDLEAGPDHDLEMANASNTMDSNLGLFLE 49


>ref|XP_002319678.1| predicted protein [Populus trichocarpa] gi|222858054|gb|EEE95601.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/49 (79%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
 Frame = +3

Query: 168 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLE 311
           MNDLMTKSF+SYVDLKKEAMKDLEAGPD  VEM NA+N +E NL +FLE
Sbjct: 1   MNDLMTKSFMSYVDLKKEAMKDLEAGPDPVVEMANASNTMESNLGMFLE 49


>ref|XP_002525472.1| syntaxin, putative [Ricinus communis] gi|223535285|gb|EEF36962.1|
           syntaxin, putative [Ricinus communis]
          Length = 313

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/49 (75%), Positives = 42/49 (85%), Gaps = 1/49 (2%)
 Frame = +3

Query: 168 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATN-VEPNLALFLE 311
           MNDLMTKSF SYVDLKKEAM+DLEAGPD  +EM NA+N ++ NL LFLE
Sbjct: 1   MNDLMTKSFTSYVDLKKEAMRDLEAGPDPDLEMANASNTMDRNLGLFLE 49


>emb|CBI20794.3| unnamed protein product [Vitis vinifera]
          Length = 239

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = +3

Query: 168 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLE 311
           MNDLMTKSF+SYVDLKKEAMKDLEAGP+Y ++M + T ++ NL LFLE
Sbjct: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPEYDLQM-SGTQMDRNLGLFLE 47


>ref|XP_002283098.1| PREDICTED: syntaxin-related protein KNOLLE [Vitis vinifera]
          Length = 311

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = +3

Query: 168 MNDLMTKSFVSYVDLKKEAMKDLEAGPDYSVEMTNATNVEPNLALFLE 311
           MNDLMTKSF+SYVDLKKEAMKDLEAGP+Y ++M + T ++ NL LFLE
Sbjct: 1   MNDLMTKSFISYVDLKKEAMKDLEAGPEYDLQM-SGTQMDRNLGLFLE 47


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