BLASTX nr result

ID: Coptis25_contig00035843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035843
         (988 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|2...    89   1e-15
ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15
ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|2...    88   3e-15

>ref|XP_002332211.1| predicted protein [Populus trichocarpa] gi|222874875|gb|EEF12006.1|
           predicted protein [Populus trichocarpa]
          Length = 1386

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 2/168 (1%)
 Frame = +1

Query: 487 RCAVVGFFVEKRLSYPFVKDAVQKQ*KLKGEFSMIADINMFY-FKFINDEDKQLAIDHGP 663
           +  +VG FV ++L YP V    ++     G   +++  N F+ F F + +     ++  P
Sbjct: 154 KSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAP 213

Query: 664 LFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGEPICMD 840
             + +R  V++ W P ++  ++ +  +P+WVRL ++P   W   G+  V+S +G P+  D
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 841 DATARRSRISYARICVVVDTKFKFPSSITVKISEGDSADIGLECEWVP 984
             T  R R+SYAR+CV +D          ++   G    I  E EW+P
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIP 321


>ref|XP_002331606.1| predicted protein [Populus trichocarpa] gi|222874002|gb|EEF11133.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 89.4 bits (220), Expect = 1e-15
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
 Frame = +1

Query: 604 MFYFKFINDEDKQLAIDHGPLFLT-SRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKH 777
           +F   F +   K+LA+  GP F   S+ F+++PWS  +      +K+ PIW++L +L  H
Sbjct: 78  VFVLDFESAHGKELALGEGPRFYDGSKPFILKPWSRDLSLEIKELKSAPIWIKLPNLRLH 137

Query: 778 LWMKNGIDFVSSIIGEPICMDDATARRSRISYARICVVVDTKFKFPSSITVKISEGDSAD 957
           LW    +  ++S++G P+  D  TA R  + +AR+CV VD     P S+T++  +G S D
Sbjct: 138 LWSPEALGKIASLVGRPLFADTVTASRETLCFARVCVEVDFDKMLPDSVTIEDDKGYSYD 197

Query: 958 IGLECEWVP 984
             +E EW P
Sbjct: 198 QKVEYEWQP 206


>ref|XP_002319850.1| predicted protein [Populus trichocarpa] gi|222858226|gb|EEE95773.1|
           predicted protein [Populus trichocarpa]
          Length = 809

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
 Frame = +1

Query: 487 RCAVVGFFVEKRLSYPFVKDAVQKQ*KLKGEFSMIADINMFY-FKFINDEDKQLAIDHGP 663
           +  +VG FV ++L YP V    ++     G   +++  N F+ F F + +     ++  P
Sbjct: 154 KSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDSVDHATNVLERAP 213

Query: 664 LFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGEPICMD 840
             + +R  V++ W P ++  ++    +P+WVRL ++P   W   G+  V+S IG P+  D
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDFARVPVWVRLYNVPLEYWTIKGLSCVASAIGVPLHAD 273

Query: 841 DATARRSRISYARICVVVDTKFKFPSSITVKISEGDSADIGLECEWVP 984
             T  R R+SYAR+CV +D          ++   G    I  E EW+P
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIP 321


>ref|XP_002331609.1| predicted protein [Populus trichocarpa] gi|222874005|gb|EEF11136.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 52/173 (30%), Positives = 88/173 (50%), Gaps = 9/173 (5%)
 Frame = +1

Query: 493 AVVGFFVEKRLSY------PFVKDAVQKQ*KLKGEFSMIAD-INMFYFKFINDEDKQLAI 651
           AVV +F+    ++       F+ + +  + +  G   + +    +F   F +   K+LA+
Sbjct: 34  AVVAYFLGHDSTFGPTSFNKFINNLIDSEWRKYGNVKVYSQGSGVFVLDFESVHGKELAL 93

Query: 652 DHGPLFLTSRI-FVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGE 825
             GP F   R  F+++PWS  +      +K+ PIW++L +L  HLW    +  + S++G 
Sbjct: 94  GEGPRFYDGRKPFILKPWSRDMSLEIEELKSAPIWIKLPNLRLHLWSPEALGKIVSLVGR 153

Query: 826 PICMDDATARRSRISYARICVVVDTKFKFPSSITVKISEGDSADIGLECEWVP 984
           P+  D  TA R  + +AR+CV VD     P SIT++  +G S D  +E EW P
Sbjct: 154 PLFADTVTASRETLCFARVCVEVDFDKMLPDSITIEDDKGYSYDQKVEYEWQP 206


>ref|XP_002333406.1| predicted protein [Populus trichocarpa] gi|222836432|gb|EEE74839.1|
           predicted protein [Populus trichocarpa]
          Length = 1166

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
 Frame = +1

Query: 487 RCAVVGFFVEKRLSYPFVKDAVQKQ*KLKGEFSMIADINMFY-FKFINDEDKQLAIDHGP 663
           +  +VG FV ++L YP V    ++     G   +++  N F+ F F   +     ++  P
Sbjct: 154 KSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAP 213

Query: 664 LFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGEPICMD 840
             + +R  V++ W P ++  ++ +  +P+WVRL ++P   W   G+  V+S +G P+  D
Sbjct: 214 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 273

Query: 841 DATARRSRISYARICVVVDTKFKFPSSITVKISEGDSADIGLECEWVP 984
             T  R R+SYAR+CV +D          ++   G    I  E EW+P
Sbjct: 274 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIP 321



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 2/168 (1%)
 Frame = +1

Query: 487  RCAVVGFFVEKRLSYPFVKDAVQKQ*KLKGEFSMIADINMFY-FKFINDEDKQLAIDHGP 663
            +  +VG FV ++L YP V    ++     G   +++  N F+ F F   +     ++  P
Sbjct: 947  KSTLVGHFVGQKLPYPVVNSIAKRIWSSYGLSEVLSSDNGFFIFNFDYVDHATNVLERAP 1006

Query: 664  LFLTSRIFVVRPWSPAVEKYRNGIKALPIWVRL-DLPKHLWMKNGIDFVSSIIGEPICMD 840
              + +R  V++ W P ++  ++ +  +P+WVRL ++P   W   G+  V+S +G P+  D
Sbjct: 1007 WHMANRPLVLKRWQPNMQFLKDDLARVPVWVRLYNVPLEYWTIKGLSCVASAVGVPLHAD 1066

Query: 841  DATARRSRISYARICVVVDTKFKFPSSITVKISEGDSADIGLECEWVP 984
              T  R R+SYAR+CV +D          ++   G    I  E EW+P
Sbjct: 1067 HTTLLRKRLSYARVCVEIDASKTLVKEYDLRCPNGLFITISAEYEWIP 1114


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