BLASTX nr result

ID: Coptis25_contig00035824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035824
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19378.3| unnamed protein product [Vitis vinifera]              110   9e-23
ref|XP_002525295.1| conserved hypothetical protein [Ricinus comm...   103   1e-20
ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267...    98   8e-19
ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785...    93   3e-17

>emb|CBI19378.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  110 bits (276), Expect = 9e-23
 Identities = 59/126 (46%), Positives = 82/126 (65%), Gaps = 1/126 (0%)
 Frame = -1

Query: 375 VKAPFRILGRARDFYVRSLTDCSGRMSEASVIVGYPGGSVNIVPRSFSVNSSRSNDDEDI 196
           +  P R+L +ARDFYVRSLTD + R+S  + + G PG  ++ +P+SFSV+SSRS D ED+
Sbjct: 15  ITIPIRVLSKARDFYVRSLTDAAERVSRGNAM-GCPGVHISTLPKSFSVSSSRSGDGEDV 73

Query: 195 KELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPCDFDED-LKTK 19
             L R+ S      +++M +  LQ     + A PRS +V +GRIDED+PCDF+ED    K
Sbjct: 74  GSLSRSGSASSSSNRVDMNV-FLQPPKMGSRAAPRSCSVGMGRIDEDRPCDFEEDSFNVK 132

Query: 18  PDLLYP 1
            D LYP
Sbjct: 133 ADFLYP 138


>ref|XP_002525295.1| conserved hypothetical protein [Ricinus communis]
           gi|223535453|gb|EEF37123.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 164

 Score =  103 bits (257), Expect = 1e-20
 Identities = 56/129 (43%), Positives = 86/129 (66%), Gaps = 7/129 (5%)
 Frame = -1

Query: 375 VKAPFRILGRARDFYVRSLTDCSGRMSEASVIVGYPGGSVNIVPRSFSVNSSRSND-DED 199
           +K+P RIL +ARDFYV+S+T+ S R+   + +    G  V  +P+S+SVNS++S+  D+D
Sbjct: 17  IKSPLRILLKARDFYVKSMTEYSDRIGYGTFMGCPTGHVVETLPKSYSVNSTKSSSRDDD 76

Query: 198 IKELMRAASQRGLREKLEMEIQQLQQLSKKTD------ALPRSRTVAIGRIDEDKPCDFD 37
            +EL+RAAS RGL  + ++ + Q QQ  K  +      ++PRS +V IGRIDE+K CD  
Sbjct: 77  YRELLRAASTRGLSSRNDLGVLQRQQSRKSPNNTRANISMPRSHSVGIGRIDEEKACDNF 136

Query: 36  EDLKTKPDL 10
           +D+K K D+
Sbjct: 137 DDIKVKTDV 145


>ref|XP_002320664.1| predicted protein [Populus trichocarpa] gi|222861437|gb|EEE98979.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score =  102 bits (253), Expect = 4e-20
 Identities = 61/137 (44%), Positives = 88/137 (64%), Gaps = 12/137 (8%)
 Frame = -1

Query: 375 VKAPFRILGRARDFYVRSLTDCSGRMSEASVIVGYPGGSVNIVPRSFSVNSSRSND-DED 199
           +KAP RIL RARDFY++ + + S ++     ++  P G+ N +PRS+SV+S++ N  D+D
Sbjct: 17  LKAPLRILARARDFYIKGMAEYSDQVC----VMSCPTGNFNTMPRSYSVSSTKPNHLDDD 72

Query: 198 IKELMRAASQRG----LREKLEMEIQQLQQLSKKTDA------LPRSRTVAIGRIDEDKP 49
            +E +RAAS R        K+ +++   QQ S K  A      +PRS TVAIGRIDE+KP
Sbjct: 73  RREPLRAASTRSNLGSRNSKINVDVPARQQYSHKKSATRLGDNMPRSHTVAIGRIDEEKP 132

Query: 48  CDFD-EDLKTKPDLLYP 1
           CDFD ED+K K + +YP
Sbjct: 133 CDFDEEDVKVKTN-VYP 148


>ref|XP_003634344.1| PREDICTED: uncharacterized protein LOC100267722 [Vitis vinifera]
          Length = 149

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 56/127 (44%), Positives = 81/127 (63%), Gaps = 2/127 (1%)
 Frame = -1

Query: 375 VKAPFRILGRARDFYVRSLTDCSGRMSEASVIVGYPGGSVNIVPRSFSVNSSRSNDDEDI 196
           +  P R+LG+A+D YVR +T+C+ R    ++  G P G    +PRS+S  SSRSND+ED 
Sbjct: 15  ITLPIRVLGKAKDLYVRGMTNCATRGYGNNM--GGPAG----MPRSYSYASSRSNDNEDF 68

Query: 195 KELMRAASQRGLREKLEMEIQQLQQLSKKTDALPRSRTVAIGRIDEDKPC-DFDE-DLKT 22
           +EL+RAAS   L   +++     Q  ++K+  +PRS +V + RIDED PC DF E + K 
Sbjct: 69  RELVRAASVNTLGHGVDLNALLQQSAAEKSKVVPRSCSVGMARIDEDGPCNDFGEVNFKA 128

Query: 21  KPDLLYP 1
           K DL+YP
Sbjct: 129 KADLMYP 135


>ref|XP_003524022.1| PREDICTED: uncharacterized protein LOC100785988 [Glycine max]
          Length = 155

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 48/117 (41%), Positives = 76/117 (64%), Gaps = 3/117 (2%)
 Frame = -1

Query: 375 VKAPFRILGRARDFYVRSLTDCSGRMSEASVIVGYPGGSVNIVPRSFSVNSSRSNDDEDI 196
           +  P R+LG+ARD YVRS+T+C  +M+ ++ +     G    +PRS+S  +SRS+++ED 
Sbjct: 16  ITTPLRMLGKARDIYVRSITNCGHKMNYSNPVDA--AGRFQALPRSYSAATSRSDNNEDF 73

Query: 195 KELMRAASQRGLREKLEMEI---QQLQQLSKKTDALPRSRTVAIGRIDEDKPCDFDE 34
            EL+RAAS R L  ++++++   QQ Q     ++ LP+S +V +GRIDED P D  E
Sbjct: 74  AELLRAASARTLGNRIDVDLVLKQQAQARPVSSNGLPKSTSVGMGRIDEDTPYDLGE 130


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