BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035820
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...    88   1e-15
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]      86   9e-15
gb|AAN72199.1| putative helicase [Arabidopsis thaliana]                85   1e-14
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...    85   1e-14
gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]      85   1e-14

>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 54/100 (54%), Positives = 64/100 (64%)
 Frame = -3

Query: 300 KRIESTSDDDITLLNERIRRDLSKREGASRXXXXNTINSEEAEKYIXXXXXXXXXXXXXX 121
           +R+E  SDD IT+LNERIRR+ SKR+  SR      ++SEEA+KYI              
Sbjct: 67  ERMEPESDD-ITILNERIRREQSKRD-VSRAP---VVDSEEADKYIQLVKEQQRRGLQKL 121

Query: 120 KGDRTGGNNNNSEGGAFSYKVDPYTLHSGDYVVHKKVGVG 1
           KG+R G      E G FSYKVDPYTL SGDYVVHKKVG+G
Sbjct: 122 KGERVG-----KENGQFSYKVDPYTLRSGDYVVHKKVGIG 156


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score = 85.5 bits (210), Expect = 9e-15
 Identities = 50/97 (51%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 ESTSDDDITLLNERIRRDLSKREGASRXXXXNTINSEEAEKYIXXXXXXXXXXXXXXKGD 112
           E   +D I+LLNERIRRDL KRE +        ++SEEA+KYI              KG 
Sbjct: 67  EFAENDSISLLNERIRRDLGKRETSR-----PAMDSEEADKYIQMVKEQQERGLQKLKGV 121

Query: 111 RTGGNNNNSEGGAFSYKVDPYTLHSGDYVVHKKVGVG 1
           R G       GG FSYKVDPY+L SGDYVVHKKVG+G
Sbjct: 122 RQG--TETGSGGGFSYKVDPYSLLSGDYVVHKKVGIG 156


>gb|AAN72199.1| putative helicase [Arabidopsis thaliana]
          Length = 822

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/97 (53%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 ESTSDDDITLLNERIRRDLSKREGASRXXXXNTINSEEAEKYIXXXXXXXXXXXXXXKGD 112
           E    D I+LLNERIRRDL KRE A        ++SEEAEKYI              KG 
Sbjct: 66  ELAESDSISLLNERIRRDLGKRETAR-----PAMDSEEAEKYIHMVKEQQERGLQKLKGI 120

Query: 111 RTGGNNNNSEGGAFSYKVDPYTLHSGDYVVHKKVGVG 1
           R G     +  GAFSYKVDPY+L SGDYVVHKKVG+G
Sbjct: 121 RQG--TKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIG 155


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/97 (53%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 ESTSDDDITLLNERIRRDLSKREGASRXXXXNTINSEEAEKYIXXXXXXXXXXXXXXKGD 112
           E    D I+LLNERIRRDL KRE A        ++SEEAEKYI              KG 
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETAR-----PAMDSEEAEKYIHMVKEQQERGLQKLKGI 121

Query: 111 RTGGNNNNSEGGAFSYKVDPYTLHSGDYVVHKKVGVG 1
           R G     +  GAFSYKVDPY+L SGDYVVHKKVG+G
Sbjct: 122 RQG--TKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIG 156


>gb|AAK43897.1|AF370520_1 putative helicase [Arabidopsis thaliana]
          Length = 823

 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 52/97 (53%), Positives = 58/97 (59%)
 Frame = -3

Query: 291 ESTSDDDITLLNERIRRDLSKREGASRXXXXNTINSEEAEKYIXXXXXXXXXXXXXXKGD 112
           E    D I+LLNERIRRDL KRE A        ++SEEAEKYI              KG 
Sbjct: 67  ELAESDSISLLNERIRRDLGKRETAR-----PAMDSEEAEKYIHMVKEQQERGLQKLKGI 121

Query: 111 RTGGNNNNSEGGAFSYKVDPYTLHSGDYVVHKKVGVG 1
           R G     +  GAFSYKVDPY+L SGDYVVHKKVG+G
Sbjct: 122 RQG--TKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIG 156