BLASTX nr result

ID: Coptis25_contig00035819 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035819
         (858 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|2...   248   1e-63
ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
ref|XP_002276725.2| PREDICTED: structure-specific endonuclease s...   241   2e-61
emb|CBI15837.3| unnamed protein product [Vitis vinifera]              241   2e-61
ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203...   238   1e-60

>ref|XP_002319418.1| predicted protein [Populus trichocarpa] gi|222857794|gb|EEE95341.1|
           predicted protein [Populus trichocarpa]
          Length = 192

 Score =  248 bits (634), Expect = 1e-63
 Identities = 110/162 (67%), Positives = 134/162 (82%), Gaps = 2/162 (1%)
 Frame = +2

Query: 311 QVGEEKKG--GFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGASSTQLKRP 484
           ++GE +KG  GFFACYLL SLCPRFK HTYIGFT+NP RRIRQHNGE+ SGA  T+ +RP
Sbjct: 1   ELGEAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRP 60

Query: 485 WEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYKMLNLPP 664
           WEM+ CIYGFPTNV+AL+FEWAWQHPT S+ V++  ++ +S  G+ + IKLAY MLNLP 
Sbjct: 61  WEMVFCIYGFPTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYTMLNLPS 120

Query: 665 WQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCY 790
           WQS+N+T+N+ ST Y   +VGCPSLPK +KVQICPMDELPCY
Sbjct: 121 WQSLNITINYFSTNYKVHSVGCPSLPKNMKVQICPMDELPCY 162


>ref|XP_002325655.1| predicted protein [Populus trichocarpa] gi|222862530|gb|EEF00037.1|
           predicted protein [Populus trichocarpa]
          Length = 207

 Score =  246 bits (628), Expect = 5e-63
 Identities = 106/161 (65%), Positives = 133/161 (82%)
 Frame = +2

Query: 311 QVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGASSTQLKRPWE 490
           +  E+ K GFFACYLL SLCPRFK HTYIGFT+NP RRIRQHNGE+ SGA  T+ +RPWE
Sbjct: 18  EAAEKGKNGFFACYLLTSLCPRFKGHTYIGFTVNPRRRIRQHNGELRSGACRTKKRRPWE 77

Query: 491 MILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYKMLNLPPWQ 670
           M++C+YGFPTNV+AL+FEWAWQHPT S+ V++  ++ +S  G+ + IKLAY MLNLP WQ
Sbjct: 78  MVICVYGFPTNVAALQFEWAWQHPTESVAVRQAAAAFKSFSGVANKIKLAYTMLNLPSWQ 137

Query: 671 SMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYT 793
           S+N+TVN+ ST+Y   + GCPSLPK +KVQICPM+ELPCY+
Sbjct: 138 SLNITVNYFSTQYKVHSAGCPSLPKNMKVQICPMNELPCYS 178


>ref|XP_002276725.2| PREDICTED: structure-specific endonuclease subunit SLX1 homolog
           2-like [Vitis vinifera]
          Length = 364

 Score =  241 bits (615), Expect = 2e-61
 Identities = 110/159 (69%), Positives = 126/159 (79%)
 Frame = +2

Query: 320 EEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGASSTQLKRPWEMIL 499
           EEK   FFACYLL SL PR K H+YIGFT+NP RRIRQHNGEIT GA  T+ KRPWEM+L
Sbjct: 18  EEKGDDFFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHNGEITCGAWKTKRKRPWEMVL 77

Query: 500 CIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYKMLNLPPWQSMN 679
           CIYGFPTNVSAL+FEWAWQHPT SL V+K  +  +SL GI + IKLAY M  LP WQS+N
Sbjct: 78  CIYGFPTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLN 137

Query: 680 LTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYTG 796
           LTVNF STKY   + GCP LP+ ++VQ+ PMDELPCY+G
Sbjct: 138 LTVNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>emb|CBI15837.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  241 bits (615), Expect = 2e-61
 Identities = 110/159 (69%), Positives = 126/159 (79%)
 Frame = +2

Query: 320 EEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGASSTQLKRPWEMIL 499
           EEK   FFACYLL SL PR K H+YIGFT+NP RRIRQHNGEIT GA  T+ KRPWEM+L
Sbjct: 18  EEKGDDFFACYLLASLSPRHKGHSYIGFTVNPRRRIRQHNGEITCGAWKTKRKRPWEMVL 77

Query: 500 CIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAYKMLNLPPWQSMN 679
           CIYGFPTNVSAL+FEWAWQHPT SL V+K  +  +SL GI + IKLAY M  LP WQS+N
Sbjct: 78  CIYGFPTNVSALQFEWAWQHPTESLAVRKAAAGFKSLSGIANKIKLAYTMFTLPAWQSLN 137

Query: 680 LTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYTG 796
           LTVNF STKY   + GCP LP+ ++VQ+ PMDELPCY+G
Sbjct: 138 LTVNFFSTKYTKHSAGCPILPEHMRVQVSPMDELPCYSG 176


>ref|XP_004145233.1| PREDICTED: uncharacterized protein LOC101203492 [Cucumis sativus]
           gi|449471301|ref|XP_004153269.1| PREDICTED:
           uncharacterized protein LOC101204996 [Cucumis sativus]
           gi|449506301|ref|XP_004162709.1| PREDICTED:
           uncharacterized protein LOC101229010 [Cucumis sativus]
          Length = 395

 Score =  238 bits (607), Expect = 1e-60
 Identities = 106/172 (61%), Positives = 134/172 (77%)
 Frame = +2

Query: 284 QNEEDCVREQVGEEKKGGFFACYLLCSLCPRFKDHTYIGFTINPCRRIRQHNGEITSGAS 463
           + +ED   E+ G E  G FF+CYLL S CPRFK HTYIGFT+NP RRIRQHNGEI  GA 
Sbjct: 16  EEKEDDEEEERGNEVNG-FFSCYLLASACPRFKGHTYIGFTVNPKRRIRQHNGEIRCGAW 74

Query: 464 STQLKRPWEMILCIYGFPTNVSALKFEWAWQHPTGSLVVKKPTSSLESLPGIGDNIKLAY 643
            T+ KRPWEM+LCIYGFPTNVSAL+FEWAWQHP  SL V+   ++ +SL G+ + +KLAY
Sbjct: 75  RTKRKRPWEMVLCIYGFPTNVSALQFEWAWQHPNESLAVRSAAATFKSLSGVANKVKLAY 134

Query: 644 KMLNLPPWQSMNLTVNFLSTKYINDAVGCPSLPKQVKVQICPMDELPCYTGG 799
            ML LP W+ +N+TVN+ STK++ +A GCPSLP+ +KVQ+ P++ELPCY+ G
Sbjct: 135 TMLTLPAWRGLNITVNYFSTKFMKNAAGCPSLPEHMKVQVSPINELPCYSEG 186


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