BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035800
         (741 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              318   1e-84
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   316   4e-84
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   293   3e-77
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   288   1e-75
ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyra...   277   1e-72

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  318 bits (814), Expect = 1e-84
 Identities = 137/192 (71%), Positives = 160/192 (83%)
 Frame = +2

Query: 5   TFSIKGCTHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRWG 184
           +FSIKGC HSYCSDCM+KYVASK+QDNV+ I+CP  NC GVLE Q C+ ILP  VFDRWG
Sbjct: 137 SFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWG 196

Query: 185 NALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKCE 364
           NALCE LILG+QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWHSGI C 
Sbjct: 197 NALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCG 256

Query: 365 EFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAA 544
           EFQKL K ER REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FCYNC A 
Sbjct: 257 EFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAP 316

Query: 545 MNPSNHNCTQCR 580
            +  +H C  CR
Sbjct: 317 SSTISHICPHCR 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  316 bits (809), Expect = 4e-84
 Identities = 136/191 (71%), Positives = 159/191 (83%)
 Frame = +2

Query: 5   TFSIKGCTHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRWG 184
           +FSIKGC HSYCSDCM+KYVASK+QDNV+ I+CP  NC GVLE Q C+ ILP  VFDRWG
Sbjct: 137 SFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSHVFDRWG 196

Query: 185 NALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKCE 364
           NALCE LILG+QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWHSGI C 
Sbjct: 197 NALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWHSGIDCG 256

Query: 365 EFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAA 544
           EFQKL K ER REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FCYNC A 
Sbjct: 257 EFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFCYNCGAP 316

Query: 545 MNPSNHNCTQC 577
            +  +H C  C
Sbjct: 317 SSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  293 bits (750), Expect = 3e-77
 Identities = 124/193 (64%), Positives = 158/193 (81%), Gaps = 1/193 (0%)
 Frame = +2

Query: 5   TFSIKGCTHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRWG 184
           +F IKGCTH+YC++CM KYV+SK+Q+N+T I CP  +C G LE + C+S+LP+ VFDRWG
Sbjct: 112 SFLIKGCTHAYCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWG 171

Query: 185 NALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKCE 364
           NALCE +ILG+QKFYCP+K+CSA+LIDD   VV+ESECP+C RMFCAQCKVPWHS I CE
Sbjct: 172 NALCEAVILGSQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCE 231

Query: 365 EFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAA 544
           E++ L K ERER+DI+LM LAK+K W+RCPKC+ FVE+ EGC +MKCRCG  FCY+C + 
Sbjct: 232 EYKMLHKDERERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCGST 291

Query: 545 -MNPSNHNCTQCR 580
            +NP  H C +C+
Sbjct: 292 DLNPVTHYCYKCK 304


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  288 bits (736), Expect = 1e-75
 Identities = 122/183 (66%), Positives = 156/183 (85%)
 Frame = +2

Query: 2   QTFSIKGCTHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRW 181
           ++ +I+GCTH+YC+DCM+KYVASKIQ+N+T I CP S C G+LE ++C+SILP+EVFDRW
Sbjct: 218 ESLAIRGCTHAYCTDCMAKYVASKIQENITGIYCPVSGCGGLLEPEYCRSILPQEVFDRW 277

Query: 182 GNALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKC 361
           GNALCE L LG+QKFYCP+K+CSA+LI+D G V++ESECPHCRR+FCA CKVPWHSGI C
Sbjct: 278 GNALCEALNLGSQKFYCPFKDCSAMLINDGGEVIRESECPHCRRLFCAHCKVPWHSGIDC 337

Query: 362 EEFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAA 541
            +FQ L K ERE+EDIMLMKLA++KKW+RCP C+ +VER+EGC +MKCR  F  C+ C++
Sbjct: 338 NKFQTLHKDEREKEDIMLMKLAENKKWRRCPICRIYVERTEGCRYMKCRYIFICCFVCSS 397

Query: 542 AMN 550
             N
Sbjct: 398 FFN 400


>ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323773|gb|EFH54194.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  277 bits (709), Expect = 1e-72
 Identities = 113/194 (58%), Positives = 146/194 (75%)
 Frame = +2

Query: 2   QTFSIKGCTHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRW 181
           +TF I GC+H YC+DC+SKY+A+K+QDN+ SI CP S C G LE   C+ ILP+EVFDRW
Sbjct: 129 ETFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQILPREVFDRW 188

Query: 182 GNALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHSGIKC 361
           G+ALCE +++ +++FYCPYK+CSALL  DE  V+K+SECPHC RM C +C   WH  + C
Sbjct: 189 GDALCEAVVMRSKRFYCPYKDCSALLFMDESEVMKDSECPHCHRMVCVECGTKWHPEMTC 248

Query: 362 EEFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAA 541
           EEFQKL + ER R+DI+L  +AK KKW+RCP CKF++E+S GCL+MKCRCG  FCYNC  
Sbjct: 249 EEFQKLAENERGRDDILLATMAKKKKWKRCPSCKFYIEKSHGCLYMKCRCGLAFCYNCGT 308

Query: 542 AMNPSNHNCTQCRR 583
                +H C  C+R
Sbjct: 309 PSRDHSHYCYNCKR 322