BLASTX nr result

ID: Coptis25_contig00035792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035792
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305229.1| predicted protein [Populus trichocarpa] gi|2...    75   5e-12
ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    75   7e-12
ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate...    74   9e-12
ref|XP_002302922.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
sp|P10967.1|ACCH3_SOLLC RecName: Full=1-aminocyclopropane-1-carb...    73   2e-11

>ref|XP_002305229.1| predicted protein [Populus trichocarpa] gi|222848193|gb|EEE85740.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 75.1 bits (183), Expect = 5e-12
 Identities = 34/74 (45%), Positives = 52/74 (70%), Gaps = 4/74 (5%)
 Frame = +3

Query: 3   GLVESGILKVPTMFVRPPNELNQLKADSNYVSYFRVPIIDLQG----EHQKVVDEIRHAS 170
           GLV+SG+ K+P  FV PP ++ +L +++N  +  ++PIIDL+G       +VV+E+R AS
Sbjct: 28  GLVDSGVTKIPRFFVHPPEDVQKLSSETNSTT-LQLPIIDLEGFESFRRLEVVNEVRKAS 86

Query: 171 ETWGFLMVVNHGVP 212
           E WGF  +VNHG+P
Sbjct: 87  EEWGFFQIVNHGIP 100


>ref|XP_002284642.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1
           [Vitis vinifera] gi|147807864|emb|CAN66433.1|
           hypothetical protein VITISV_027452 [Vitis vinifera]
          Length = 365

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   GLVESGILKVPTMFVRPPNELNQLKADSNYVSYFRVPIIDLQG------EHQKVVDEIRH 164
           GLV++G+ KVP MF++PP+ L        Y + F  P++DLQG         K+VD ++ 
Sbjct: 32  GLVDAGVSKVPRMFIQPPDNLR------TYTTQFNFPVVDLQGMDNDPIRRNKIVDMVKD 85

Query: 165 ASETWGFLMVVNHGVP 212
           ASETWGF  VVNHG+P
Sbjct: 86  ASETWGFFNVVNHGIP 101


>ref|XP_003632012.1| PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 3
           [Vitis vinifera]
          Length = 673

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   GLVESGILKVPTMFVRPPNELNQLKADSNYVSYFRVPIIDLQG------EHQKVVDEIRH 164
           GL ++G+ KVP MF++PP+ L        Y + F  P++DLQG         K+VD +R 
Sbjct: 32  GLADAGVSKVPRMFIQPPDNLR------TYTTQFNFPVVDLQGMDNDPIRRNKIVDMVRD 85

Query: 165 ASETWGFLMVVNHGVP 212
           ASETWGF  VVNHG+P
Sbjct: 86  ASETWGFFNVVNHGIP 101


>ref|XP_002302922.1| predicted protein [Populus trichocarpa] gi|222844648|gb|EEE82195.1|
           predicted protein [Populus trichocarpa]
          Length = 385

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 36/74 (48%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = +3

Query: 3   GLVESGILKVPTMFVRPPNELNQLKADSNYVSYFRVPIIDLQG----EHQKVVDEIRHAS 170
           GL +SG++K+P  FV PP +  Q  + S+ +S  +VPIID +G       +VV+EIR AS
Sbjct: 38  GLADSGMIKIPRFFVHPPEKTQQPSSKSSNIS-LQVPIIDFEGFESSRRMEVVNEIRKAS 96

Query: 171 ETWGFLMVVNHGVP 212
           E WGF  VVNHG+P
Sbjct: 97  ENWGFFQVVNHGIP 110


>sp|P10967.1|ACCH3_SOLLC RecName: Full=1-aminocyclopropane-1-carboxylate oxidase homolog;
           AltName: Full=Protein E8 gi|19199|emb|CAA31789.1| E8
           protein [Solanum lycopersicum]
          Length = 363

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 37/77 (48%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
 Frame = +3

Query: 3   GLVESGILKVPTMFVRPPNELNQLKADSNYVSYFRVPIIDLQG------EHQKVVDEIRH 164
           GLV+SGI KVP +FV PP +  + K ++++V     P+IDLQG      +H+++VD++R 
Sbjct: 28  GLVDSGITKVPQIFVLPPKDRAK-KCETHFV----FPVIDLQGIDEDPIKHKEIVDKVRD 82

Query: 165 ASETWGFLMVVNHGVPS 215
           ASE WGF  VVNHG+P+
Sbjct: 83  ASEKWGFFQVVNHGIPT 99


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