BLASTX nr result

ID: Coptis25_contig00035787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035787
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-ca...   144   7e-33
ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31
ref|XP_002266815.1| PREDICTED: probable polygalacturonase non-ca...   135   3e-30
ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|2...   135   5e-30
ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit be...   134   6e-30

>ref|XP_002266341.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP630-like [Vitis vinifera]
          Length = 633

 Score =  144 bits (363), Expect = 7e-33
 Identities = 63/87 (72%), Positives = 75/87 (86%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y DGGNAGT+ F SYRDQ+NVGDDSF+SY KN+N+ +V F NYGKSFNEGTDTF GYGKG
Sbjct: 302 YGDGGNAGTDTFISYRDQSNVGDDSFKSYAKNSNSAEVDFVNYGKSFNEGTDTFAGYGKG 361

Query: 149 SANHEIGFKIYGVNTTFKDYSQKGVTF 69
           + NH+I FKIYGVN TF DY++KG++F
Sbjct: 362 ATNHKINFKIYGVNNTFTDYAKKGISF 388



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 37/89 (41%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y D GN   + FTSY ++ N GD+SF SYGKN N    +F +YG S N    TF GYG+ 
Sbjct: 218 YTDDGNGRQQSFTSYTNETNSGDESFSSYGKNGNGSPNEFTSYGSSSNVIGSTFTGYGET 277

Query: 149 SANHEIGFKIYGVN-----TTFKDYSQKG 78
                  FK YG +       FK Y   G
Sbjct: 278 GNAANDTFKSYGFDGNVPENNFKKYGDGG 306


>ref|XP_002311777.1| predicted protein [Populus trichocarpa] gi|222851597|gb|EEE89144.1|
           predicted protein [Populus trichocarpa]
          Length = 598

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/88 (71%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y DGGNAG + F +YR+++NVGDDSFQ+Y KN+NAEK  FANYGKSFNEGTD F GYG G
Sbjct: 264 YGDGGNAGVDSFATYREKSNVGDDSFQTYAKNSNAEKANFANYGKSFNEGTDKFSGYGNG 323

Query: 149 SANHEIGFKIYGVNTTFKDY-SQKGVTF 69
           +   +IGFKIYGVNTTFKDY ++KGVTF
Sbjct: 324 AMGQQIGFKIYGVNTTFKDYANKKGVTF 351


>ref|XP_002266815.1| PREDICTED: probable polygalacturonase non-catalytic subunit
           JP650-like [Vitis vinifera]
          Length = 624

 Score =  135 bits (341), Expect = 3e-30
 Identities = 58/87 (66%), Positives = 74/87 (85%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y DGGN+G + F SYR+Q+NVGDDSF+SY KN+++ +V FANYG+SFNEGTDTF GYGKG
Sbjct: 293 YGDGGNSGIDTFKSYRNQSNVGDDSFRSYAKNSHSAEVNFANYGQSFNEGTDTFTGYGKG 352

Query: 149 SANHEIGFKIYGVNTTFKDYSQKGVTF 69
           +  H+IGFK YGVN TF DY++KG++F
Sbjct: 353 ATGHKIGFKFYGVNNTFTDYAKKGISF 379



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/89 (34%), Positives = 41/89 (46%), Gaps = 5/89 (5%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y   GN   + F SY  ++N GD  F SYGKN+     +F +YG++ N    TF GYG+ 
Sbjct: 209 YSSDGNTRKQSFRSYSTESNAGDQYFTSYGKNSQGSPNEFTSYGENTNVIGSTFTGYGRT 268

Query: 149 SANHEIGFKIYGVN-----TTFKDYSQKG 78
           +      F  YG         FK Y   G
Sbjct: 269 ANAANDKFTSYGFGGNVPVNNFKSYGDGG 297


>ref|XP_002314620.1| predicted protein [Populus trichocarpa] gi|222863660|gb|EEF00791.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  135 bits (339), Expect = 5e-30
 Identities = 61/88 (69%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y DGGN G + F +YR+++NVGDDSFQSY KN+NA+K  F NYGKSFNEGTD F GYGKG
Sbjct: 279 YGDGGNGGVDSFANYREKSNVGDDSFQSYAKNSNAQKADFVNYGKSFNEGTDKFTGYGKG 338

Query: 149 SANHEIGFKIYGVNTTFKDYS-QKGVTF 69
           +   +IGFKIYGVNTTFKDY+ +K VTF
Sbjct: 339 AVGQQIGFKIYGVNTTFKDYARKKDVTF 366



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/89 (38%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y DG N   + F++Y + AN GD++F SYGKN N    +F+ YGKS N     F  YG+ 
Sbjct: 195 YSDGANGKGQKFSTYTEDANAGDEAFTSYGKNGNGVPNEFSGYGKSSNVIGSDFSNYGEA 254

Query: 149 SANHEIGFKIYGVN-----TTFKDYSQKG 78
                  FK YGV+       +K+Y   G
Sbjct: 255 GNGASDTFKTYGVDGNVPENNYKNYGDGG 283


>ref|XP_002525383.1| Polygalacturonase-1 non-catalytic subunit beta precursor, putative
           [Ricinus communis] gi|223535346|gb|EEF37021.1|
           Polygalacturonase-1 non-catalytic subunit beta
           precursor, putative [Ricinus communis]
          Length = 631

 Score =  134 bits (338), Expect = 6e-30
 Identities = 60/87 (68%), Positives = 72/87 (82%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y  GGN G   FTSYRDQ+NVGDDSFQSY K +N ++V F NYGKSFNEGTDTFKGYG+G
Sbjct: 297 YGAGGNGGGSGFTSYRDQSNVGDDSFQSYAKESNGQEVNFNNYGKSFNEGTDTFKGYGQG 356

Query: 149 SANHEIGFKIYGVNTTFKDYSQKGVTF 69
           +  H+IGFK+YGVN TFK+Y++ GV+F
Sbjct: 357 ANAHKIGFKMYGVNNTFKEYAKLGVSF 383



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/88 (34%), Positives = 39/88 (44%), Gaps = 2/88 (2%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y   G  G  DF +Y +Q NV +  F SY   AN ++  F  Y    N G + F  YGK 
Sbjct: 185 YGTSGTGGKSDFKNYAEQVNVPNLVFTSYSDAANGKQQSFTRYSGDTNSGNEKFTSYGKN 244

Query: 149 SANHEIGFKIYGVNTTF--KDYSQKGVT 72
                  FK YG N+     D++  G T
Sbjct: 245 GNGVPTNFKGYGENSNVIGSDFNNYGET 272



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/90 (36%), Positives = 41/90 (45%), Gaps = 6/90 (6%)
 Frame = -3

Query: 329 YDDGGNAGTEDFTSYRDQANVGDDSFQSYGKNANAEKVKFANYGKSFNEGTDTFKGYGKG 150
           Y D  N   + FT Y    N G++ F SYGKN N     F  YG++ N     F  YG+ 
Sbjct: 213 YSDAANGKQQSFTRYSGDTNSGNEKFTSYGKNGNGVPTNFKGYGENSNVIGSDFNNYGE- 271

Query: 149 SANHEI-GFKIYGVN-----TTFKDYSQKG 78
           +AN E   F  YG N       FK+Y   G
Sbjct: 272 TANAEFDNFTSYGFNGNVPENKFKNYGAGG 301


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