BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035780
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   219   1e-55
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   213   2e-53
emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]   206   2e-51
ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   203   1e-50
ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containi...   203   1e-50

>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  219 bits (559), Expect = 1e-55
 Identities = 112/169 (66%), Positives = 133/169 (78%)
 Frame = -2

Query: 509 ISKPHYNSLLYLCSRSNTSGSLENSVSDEKLGLSRGFEIFKQMGIDGIAPNEATFTSVAR 330
           +S+ HYN LLYLCS S ++G  EN V+   L L RGFEIFKQMG+DGI PNEATFTS AR
Sbjct: 76  LSQHHYNVLLYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVDGIEPNEATFTSAAR 131

Query: 329 LAAMKEDPEMAFELVKKMMSVNIPSRLRSYEPALLGFCKKGEADKAYEVDAHMLASGICP 150
           LA   EDPEMAF LVK+M S  IP +LRSY P L GFCKKG+AD+AYEVDAHM+ SG+  
Sbjct: 132 LACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMMESGVVA 191

Query: 149 EEQELAALLRVSVDVGKAEKVYEMLHRLRSSVRQVSESTAEIVQEWFKS 3
           EE EL ALL +SV+  + ++VYEM+HRLR+SVRQVSESTAE+V+ WF S
Sbjct: 192 EEPELCALLGLSVESRRVDRVYEMVHRLRASVRQVSESTAEVVERWFNS 240


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  213 bits (541), Expect = 2e-53
 Identities = 110/169 (65%), Positives = 132/169 (78%)
 Frame = -2

Query: 509 ISKPHYNSLLYLCSRSNTSGSLENSVSDEKLGLSRGFEIFKQMGIDGIAPNEATFTSVAR 330
           +S+ +YN LLYLCS S ++G  EN V+   L L RGFEIFKQMG+DGI PNEATFTS AR
Sbjct: 445 LSQHNYNVLLYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVDGIEPNEATFTSAAR 500

Query: 329 LAAMKEDPEMAFELVKKMMSVNIPSRLRSYEPALLGFCKKGEADKAYEVDAHMLASGICP 150
           LA   EDPEMAF LVK+M S  IP +LRSY P L GFCKKG+A++AYEVDAHM+ SG+  
Sbjct: 501 LACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGVVA 560

Query: 149 EEQELAALLRVSVDVGKAEKVYEMLHRLRSSVRQVSESTAEIVQEWFKS 3
           EE EL ALL +SV+    ++VYEM+HRLR+SVRQVSESTAE+V+ WF S
Sbjct: 561 EEPELCALLGLSVESRWVDQVYEMMHRLRASVRQVSESTAEVVERWFNS 609


>emb|CAN79167.1| hypothetical protein VITISV_031236 [Vitis vinifera]
          Length = 696

 Score =  206 bits (524), Expect = 2e-51
 Identities = 107/169 (63%), Positives = 129/169 (76%)
 Frame = -2

Query: 509 ISKPHYNSLLYLCSRSNTSGSLENSVSDEKLGLSRGFEIFKQMGIDGIAPNEATFTSVAR 330
           +S+ +YN LLYLCS S ++G  EN V+   L L RGFEIFKQMG+DGI PNEATFTS  R
Sbjct: 445 LSQHNYNVLLYLCSCSGSNGD-ENVVN---LALKRGFEIFKQMGVDGIEPNEATFTSATR 500

Query: 329 LAAMKEDPEMAFELVKKMMSVNIPSRLRSYEPALLGFCKKGEADKAYEVDAHMLASGICP 150
           LA   EDPEMAF LVK+M S  IP +LRSY P L  FCKKG+AD+AYEVDAHM+ SG+  
Sbjct: 501 LACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFRFCKKGDADRAYEVDAHMVESGVVA 560

Query: 149 EEQELAALLRVSVDVGKAEKVYEMLHRLRSSVRQVSESTAEIVQEWFKS 3
           EE EL ALL +SV+    ++V+EM+H LR+SVRQVSESTAE+V+ WF S
Sbjct: 561 EEPELCALLGLSVESRWVDQVHEMMHHLRASVRQVSESTAEVVERWFNS 609


>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223534642|gb|EEF36338.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 589

 Score =  203 bits (517), Expect = 1e-50
 Identities = 103/174 (59%), Positives = 135/174 (77%), Gaps = 3/174 (1%)
 Frame = -2

Query: 515 ILISKPHYNSLLYLCSRSNTSGSLENSVSDEK---LGLSRGFEIFKQMGIDGIAPNEATF 345
           + +++ HYN LLYLCS S +S  L  + ++EK   +   RGFEIF+QM ID + PNEATF
Sbjct: 136 VQLNQHHYNVLLYLCS-SGSSVELGGNGANEKASNMQFKRGFEIFQQMVIDKVPPNEATF 194

Query: 344 TSVARLAAMKEDPEMAFELVKKMMSVNIPSRLRSYEPALLGFCKKGEADKAYEVDAHMLA 165
           T+ ARLA   EDPEMAF+L+K+M   +I  +LRSY PAL GFCKKG AD+AY VDAHM  
Sbjct: 195 TNAARLAIAMEDPEMAFDLIKQMKCFDILPKLRSYGPALFGFCKKGMADRAYAVDAHMAE 254

Query: 164 SGICPEEQELAALLRVSVDVGKAEKVYEMLHRLRSSVRQVSESTAEIVQEWFKS 3
           SG+ PEE EL+ALL++SVD+ +A+KVYEMLHRLR++VRQV+E+T +I++ WFKS
Sbjct: 255 SGVMPEEPELSALLKLSVDIKRADKVYEMLHRLRATVRQVTETTIDIIEAWFKS 308


>ref|XP_003549390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  203 bits (516), Expect = 1e-50
 Identities = 105/171 (61%), Positives = 130/171 (76%)
 Frame = -2

Query: 515 ILISKPHYNSLLYLCSRSNTSGSLENSVSDEKLGLSRGFEIFKQMGIDGIAPNEATFTSV 336
           +L+S  HYN LLYLCS       +E++     LGL RGFEIF+QM  D + PNEATFT+ 
Sbjct: 104 VLLSLDHYNKLLYLCS-------VESAAGVPHLGLKRGFEIFQQMLNDRVQPNEATFTNA 156

Query: 335 ARLAAMKEDPEMAFELVKKMMSVNIPSRLRSYEPALLGFCKKGEADKAYEVDAHMLASGI 156
           ARLAA KEDP+MAFEL+K+M +V I  +LRSYEPAL GFCK+G+A+KAY VDA M+ SGI
Sbjct: 157 ARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCKRGDAEKAYLVDADMVESGI 216

Query: 155 CPEEQELAALLRVSVDVGKAEKVYEMLHRLRSSVRQVSESTAEIVQEWFKS 3
             EE EL+ALL VSV+  K +KVYE+LHRLR+++RQVSEST  IV+ WF S
Sbjct: 217 VAEEPELSALLEVSVNANKEDKVYEVLHRLRATLRQVSESTLGIVENWFNS 267