BLASTX nr result

ID: Coptis25_contig00035758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035758
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303060.1| AP2 domain-containing transcription factor [...    55   6e-06

>ref|XP_002303060.1| AP2 domain-containing transcription factor [Populus trichocarpa]
           gi|222844786|gb|EEE82333.1| AP2 domain-containing
           transcription factor [Populus trichocarpa]
          Length = 153

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
 Frame = +2

Query: 50  MVSLRRRKLLGFHTGIVPFEVELPSHGDERNVSENPSQH-KATSVHPVPLPDLNQPDESI 226
           MVSLRRRKLLG   G   F   LP   D        +Q+ ++ SVHP+P  D NQP+E  
Sbjct: 1   MVSLRRRKLLGLCAGRSSFLTPLPRFFDNGTAPVGSTQNGRSVSVHPLPSDDANQPEEKT 60

Query: 227 ISKXXXXXXXXXXXXXXKEEQIQSY 301
           I+K              KE++ Q+Y
Sbjct: 61  IAKVGAGSSNVSASSSSKEQRSQAY 85


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