BLASTX nr result

ID: Coptis25_contig00035717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035717
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|2...   212   4e-53
ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|2...   210   1e-52
ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transpor...   205   5e-51
emb|CBI34989.3| unnamed protein product [Vitis vinifera]              205   5e-51
ref|XP_002517413.1| amino acid permease, putative [Ricinus commu...   204   1e-50

>ref|XP_002331906.1| predicted protein [Populus trichocarpa] gi|222874578|gb|EEF11709.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  212 bits (539), Expect = 4e-53
 Identities = 111/152 (73%), Positives = 129/152 (84%), Gaps = 2/152 (1%)
 Frame = +3

Query: 3   QRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGT-VPLSIFWLLPQYILLGFSD 179
           QRMGIGM LS+IAM+ AA+VETKRLEISR+ EV+     T VPLSIFWLLPQYILLG SD
Sbjct: 377 QRMGIGMVLSIIAMVIAALVETKRLEISRKMEVLDPKLETEVPLSIFWLLPQYILLGISD 436

Query: 180 VFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIEFVTSD-GQGRHSWF 356
           +FTVVGMQEFFY+EVP RM+TMG+AL+ SVFGVGSFLSA+LIS++E+ TS  G+GR SWF
Sbjct: 437 IFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALLISLVEYFTSSRGKGR-SWF 495

Query: 357 SDDMREAQLDKYYWFLALLSTLSLMVFAHLCK 452
           SDDMREA+ DKYYW LALLS LSL+ +   CK
Sbjct: 496 SDDMREARFDKYYWLLALLSVLSLVFYVIFCK 527


>ref|XP_002305027.1| predicted protein [Populus trichocarpa] gi|222847991|gb|EEE85538.1|
           predicted protein [Populus trichocarpa]
          Length = 540

 Score =  210 bits (534), Expect = 1e-52
 Identities = 109/153 (71%), Positives = 127/153 (83%), Gaps = 1/153 (0%)
 Frame = +3

Query: 3   QRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGT-VPLSIFWLLPQYILLGFSD 179
           +RMGIGM LS+IAM  AA+VETKRLEI ++ EVV     T VPLSIFWLLPQYILLG SD
Sbjct: 377 ERMGIGMVLSIIAMAIAALVETKRLEIGQKMEVVDQKMETEVPLSIFWLLPQYILLGISD 436

Query: 180 VFTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIEFVTSDGQGRHSWFS 359
           +FTVVGMQEFFY+EVP RM+TMG+AL+ SVFGVGSFLSA+LIS++E+ TS   G+ SWFS
Sbjct: 437 IFTVVGMQEFFYSEVPVRMRTMGIALYTSVFGVGSFLSALLISLVEYFTSSTGGK-SWFS 495

Query: 360 DDMREAQLDKYYWFLALLSTLSLMVFAHLCKHY 458
           DDMREA+LDKYYW LALLS LSL+ +   CK Y
Sbjct: 496 DDMREARLDKYYWLLALLSVLSLIFYVVFCKCY 528


>ref|XP_003633812.1| PREDICTED: probable peptide/nitrate transporter At5g14940-like
           [Vitis vinifera]
          Length = 533

 Score =  205 bits (521), Expect = 5e-51
 Identities = 105/152 (69%), Positives = 123/152 (80%)
 Frame = +3

Query: 3   QRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFSDV 182
           QRMGIGM LS+IAM+ AA+VE KRL IS + E     + TVPLSIFWLLPQYI+LG +D+
Sbjct: 376 QRMGIGMVLSIIAMVIAALVEKKRLSISSKLES---QSETVPLSIFWLLPQYIILGIADI 432

Query: 183 FTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIEFVTSDGQGRHSWFSD 362
           FTVVGMQEFFY EVP RM+TMG+AL+ SVFGVGSF+SA LI +IE  TS G GR  WFSD
Sbjct: 433 FTVVGMQEFFYGEVPIRMRTMGIALYSSVFGVGSFMSAFLIWLIEIFTSSG-GRQGWFSD 491

Query: 363 DMREAQLDKYYWFLALLSTLSLMVFAHLCKHY 458
           DMREA+LDKYYW LAL ST SL+++  LCK+Y
Sbjct: 492 DMREARLDKYYWLLALSSTFSLLLYMLLCKYY 523


>emb|CBI34989.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score =  205 bits (521), Expect = 5e-51
 Identities = 105/152 (69%), Positives = 123/152 (80%)
 Frame = +3

Query: 3   QRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFSDV 182
           QRMGIGM LS+IAM+ AA+VE KRL IS + E     + TVPLSIFWLLPQYI+LG +D+
Sbjct: 376 QRMGIGMVLSIIAMVIAALVEKKRLSISSKLES---QSETVPLSIFWLLPQYIILGIADI 432

Query: 183 FTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIEFVTSDGQGRHSWFSD 362
           FTVVGMQEFFY EVP RM+TMG+AL+ SVFGVGSF+SA LI +IE  TS G GR  WFSD
Sbjct: 433 FTVVGMQEFFYGEVPIRMRTMGIALYSSVFGVGSFMSAFLIWLIEIFTSSG-GRQGWFSD 491

Query: 363 DMREAQLDKYYWFLALLSTLSLMVFAHLCKHY 458
           DMREA+LDKYYW LAL ST SL+++  LCK+Y
Sbjct: 492 DMREARLDKYYWLLALSSTFSLLLYMLLCKYY 523


>ref|XP_002517413.1| amino acid permease, putative [Ricinus communis]
           gi|223543424|gb|EEF44955.1| amino acid permease,
           putative [Ricinus communis]
          Length = 536

 Score =  204 bits (518), Expect = 1e-50
 Identities = 110/164 (67%), Positives = 125/164 (76%), Gaps = 5/164 (3%)
 Frame = +3

Query: 3   QRMGIGMFLSVIAMIFAAVVETKRLEISRRTEVVLLPAGTVPLSIFWLLPQYILLGFSDV 182
           QRMGIGM LS+IAMI AAVVE KR+ ISR     +  + TVPLSIFWLLPQYILLG SD+
Sbjct: 378 QRMGIGMVLSIIAMIIAAVVERKRIMISRE----MPHSETVPLSIFWLLPQYILLGISDI 433

Query: 183 FTVVGMQEFFYTEVPSRMKTMGMALHLSVFGVGSFLSAILISVIEFVTSDGQGRHSWFSD 362
           FTVVGMQEFFY EVP RMKTMG+AL+ SVFGVGSF SA LISVIE  TS  +G  SWF+D
Sbjct: 434 FTVVGMQEFFYNEVPVRMKTMGIALYTSVFGVGSFFSAFLISVIEAFTS-SRGTKSWFTD 492

Query: 363 DMREAQLDKYYWFLALLSTLSLMVFAHLCKHYNR-----NENCK 479
           DMREA+LD YYW LA LS LS++ +  LCK Y+      N+N K
Sbjct: 493 DMREARLDNYYWLLAFLSALSMLFYVILCKFYSSSSGVDNQNSK 536


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