BLASTX nr result

ID: Coptis25_contig00035715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035715
         (1190 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514661.1| conserved hypothetical protein [Ricinus comm...    73   1e-10
ref|XP_002966498.1| hypothetical protein SELMODRAFT_439529 [Sela...    60   1e-06
ref|XP_002982340.1| hypothetical protein SELMODRAFT_445123 [Sela...    60   1e-06

>ref|XP_002514661.1| conserved hypothetical protein [Ricinus communis]
           gi|223546265|gb|EEF47767.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 565

 Score = 73.2 bits (178), Expect = 1e-10
 Identities = 42/112 (37%), Positives = 64/112 (57%), Gaps = 6/112 (5%)
 Frame = -1

Query: 320 PNSPAIKSTWKGSFEILGTT-----YGTFYAHPPERSSREACQVSQQMDAMLKFKLVPRL 156
           P  PA+  TWKG F+ + T      YG F A PP R SR A +++Q+M  +L+ +L+PR 
Sbjct: 318 PFFPALNVTWKGGFKFIDTAKPGKFYGGFQAQPPSRVSRRAYELAQKMPIVLQIELLPR- 376

Query: 155 DVWPQIFNIGPPCSDDIAL-FFCAFNSYRCKEEYIDLLNMIEERDSSLQTFL 3
            VW  +F    P   DIAL FF + N+ R K+ +     ++E + S L+T++
Sbjct: 377 HVWADVFQKDYPDFRDIALYFFPSENTERSKDNHASFFKLMEIQSSVLRTYI 428


>ref|XP_002966498.1| hypothetical protein SELMODRAFT_439529 [Selaginella moellendorffii]
           gi|300165918|gb|EFJ32525.1| hypothetical protein
           SELMODRAFT_439529 [Selaginella moellendorffii]
          Length = 1119

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -1

Query: 329 EDLPNSPAIKSTWKGSFEILG----TTYGTFYAHPPERSSREACQVSQQMDAMLKFKLVP 162
           E  P  P     W GSFE+      ++Y    AHP ++++ +  + S+ + + LK   V 
Sbjct: 601 EASPAVPTANVLWSGSFEVSAKGSVSSYDGIQAHPSDKAAPKVLEASKLLSSPLKLHEVE 660

Query: 161 RLDVWPQIFNIGPPCSDDIALFFCAFNSYRCKEEYIDLLNMIEERDSSLQTFL 3
           R   WP+ F   PP   DIAL+F   ++     +Y  LL+ + + D  L++F+
Sbjct: 661 RASAWPKKFLTNPPNDQDIALYFFPVDNGSYPTQYNQLLDRMVKSDLVLKSFV 713


>ref|XP_002982340.1| hypothetical protein SELMODRAFT_445123 [Selaginella moellendorffii]
           gi|300149932|gb|EFJ16585.1| hypothetical protein
           SELMODRAFT_445123 [Selaginella moellendorffii]
          Length = 1119

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
 Frame = -1

Query: 329 EDLPNSPAIKSTWKGSFEILG----TTYGTFYAHPPERSSREACQVSQQMDAMLKFKLVP 162
           E  P  P     W GSFE+      ++Y    AHP ++++ +  + S+ + + LK   V 
Sbjct: 601 EASPAVPTANVLWSGSFEVSAKGSVSSYDGIQAHPSDKAAPKVLEASKLLSSPLKLHEVE 660

Query: 161 RLDVWPQIFNIGPPCSDDIALFFCAFNSYRCKEEYIDLLNMIEERDSSLQTFL 3
           R   WP+ F   PP   DIAL+F   ++     +Y  LL+ + + D  L++F+
Sbjct: 661 RASAWPKKFLTNPPNDQDIALYFFPVDNGSYPTQYNQLLDRMVKSDLVLKSFV 713


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