BLASTX nr result

ID: Coptis25_contig00035708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035708
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25412.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246...   145   3e-33
emb|CBI18099.3| unnamed protein product [Vitis vinifera]              140   8e-32
ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267...   140   8e-32
ref|XP_002323633.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31

>emb|CBI25412.3| unnamed protein product [Vitis vinifera]
          Length = 683

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/117 (58%), Positives = 82/117 (70%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           ERFDPR  SW  + +M T RG HS+ A NEK+YA GG+DGT  V  VEV DPR G W  G
Sbjct: 561 ERFDPRERSWTRLENMSTRRGCHSLAALNEKLYALGGYDGTNMVPTVEVFDPRIGSWMTG 620

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHYKEDSGWLVIKSKAIGKRSF 1
           +SM+ PR  +GAVV+GESIYVIGG++     +DTVE YKE  GWLV   KA+GKR F
Sbjct: 621 ESMNDPRGYSGAVVLGESIYVIGGLKDNEEILDTVECYKEGHGWLVTSLKAVGKRCF 677



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           E ++P T  W S PS+   +G  + V+ N+KI+A GG +G    SEVEVLDP  G W   
Sbjct: 467 ESYNPMTDQWVSRPSLTQRKGSLAGVSLNDKIFAIGGGNGVECFSEVEVLDPETGRWISA 526

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHY 58
            SM Q R    A  +   +Y +GG   G +++ +VE +
Sbjct: 527 PSMQQKRFGLAATELNGMLYAVGG-YDGEDYLKSVERF 563


>ref|XP_002273969.1| PREDICTED: uncharacterized protein LOC100246676 [Vitis vinifera]
          Length = 818

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/117 (58%), Positives = 82/117 (70%)
 Frame = -2

Query: 351  ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
            ERFDPR  SW  + +M T RG HS+ A NEK+YA GG+DGT  V  VEV DPR G W  G
Sbjct: 696  ERFDPRERSWTRLENMSTRRGCHSLAALNEKLYALGGYDGTNMVPTVEVFDPRIGSWMTG 755

Query: 171  DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHYKEDSGWLVIKSKAIGKRSF 1
            +SM+ PR  +GAVV+GESIYVIGG++     +DTVE YKE  GWLV   KA+GKR F
Sbjct: 756  ESMNDPRGYSGAVVLGESIYVIGGLKDNEEILDTVECYKEGHGWLVTSLKAVGKRCF 812



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 37/98 (37%), Positives = 54/98 (55%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           E ++P T  W S PS+   +G  + V+ N+KI+A GG +G    SEVEVLDP  G W   
Sbjct: 602 ESYNPMTDQWVSRPSLTQRKGSLAGVSLNDKIFAIGGGNGVECFSEVEVLDPETGRWISA 661

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHY 58
            SM Q R    A  +   +Y +GG   G +++ +VE +
Sbjct: 662 PSMQQKRFGLAATELNGMLYAVGG-YDGEDYLKSVERF 698


>emb|CBI18099.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/117 (57%), Positives = 78/117 (66%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           ER DPR  SW  +  MKT RG H+VV  NEK+YA GGFDG   V  VE+ DPR   W DG
Sbjct: 523 ERLDPREHSWTRIGGMKTKRGSHTVVVLNEKLYAMGGFDGNTMVPSVEIYDPRVDSWMDG 582

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHYKEDSGWLVIKSKAIGKRSF 1
           DSM+Q R  + A V+ +SIYVIGGV+ G N + TVE Y+E  GW VIK  AIGKR F
Sbjct: 583 DSMNQSRGYSAAAVVNKSIYVIGGVEDGENVVGTVELYEEGEGWRVIKQTAIGKRCF 639


>ref|XP_002264808.1| PREDICTED: uncharacterized protein LOC100267149 [Vitis vinifera]
          Length = 664

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/117 (57%), Positives = 78/117 (66%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           ER DPR  SW  +  MKT RG H+VV  NEK+YA GGFDG   V  VE+ DPR   W DG
Sbjct: 542 ERLDPREHSWTRIGGMKTKRGSHTVVVLNEKLYAMGGFDGNTMVPSVEIYDPRVDSWMDG 601

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHYKEDSGWLVIKSKAIGKRSF 1
           DSM+Q R  + A V+ +SIYVIGGV+ G N + TVE Y+E  GW VIK  AIGKR F
Sbjct: 602 DSMNQSRGYSAAAVVNKSIYVIGGVEDGENVVGTVELYEEGEGWRVIKQTAIGKRCF 658


>ref|XP_002323633.1| predicted protein [Populus trichocarpa] gi|222868263|gb|EEF05394.1|
           predicted protein [Populus trichocarpa]
          Length = 657

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/118 (55%), Positives = 80/118 (67%)
 Frame = -2

Query: 354 AERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTD 175
           AERFDPR  SW  + SM   RG HS+V  NEK+YA GG+DG+  VS  E+LDPR   W  
Sbjct: 534 AERFDPREHSWSRIASMNAKRGCHSLVVLNEKLYALGGYDGSTMVSSTEILDPRLDLWIP 593

Query: 174 GDSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHYKEDSGWLVIKSKAIGKRSF 1
           G+ M++PR  A A  I ESIYV+GG++S  N IDTVEH+K+  GW   KS+AI KR F
Sbjct: 594 GEPMNKPRGYAAAAAIKESIYVVGGLESDENMIDTVEHFKQGQGWQEKKSRAIKKRCF 651



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/110 (30%), Positives = 52/110 (47%), Gaps = 1/110 (0%)
 Frame = -2

Query: 351 ERFDPRTISWESVPSMKTSRGGHSVVAFNEKIYAFGGFDGTRNVSEVEVLDPRFGPWTDG 172
           E ++P    W   PS+   +G  +    N+KI+A GG +G    ++VE+L    G W   
Sbjct: 441 ESYNPANDQWTPRPSLTGKKGSLAGATLNDKIFAMGGGNGVECFADVEMLVLDIGKWIPT 500

Query: 171 DSMHQPRVSAGAVVIGESIYVIGGVQSGSNFIDTVEHY-KEDSGWLVIKS 25
            S+ Q R +  AV +   +Y  GG   GS++  T E +   +  W  I S
Sbjct: 501 RSLLQKRFALAAVELNGVLYATGGF-DGSDYSKTAERFDPREHSWSRIAS 549


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