BLASTX nr result

ID: Coptis25_contig00035699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035699
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   107   1e-21
ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [S...   107   1e-21
gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indi...   100   2e-19
ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [S...    95   7e-18
ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [S...    91   1e-16

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/129 (47%), Positives = 75/129 (58%), Gaps = 2/129 (1%)
 Frame = -2

Query: 383 TPILIIGDLNIILSSDEKSGGRPFVHSDCQPTIDIIRDLALLDSGFKGYPFTWSNKRTTP 204
           TP L+ GD+N +L  +EK GGR       +   D I   ALLD GF+G  FTW+N RT  
Sbjct: 132 TPWLVAGDMNEVLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGG 191

Query: 203 DNIQKRLDRALNNSEWSLLFP*TMIYHLPATVSDHSP--IPLNTQP*SHDFPKPFKFQHM 30
             I++RLDRAL NSEW  LFP T + HLP T SDH P  I  N  P S  F  PF+ + +
Sbjct: 192 SLIKERLDRALVNSEWLDLFPDTKVIHLPRTFSDHCPLLILFNENPRSESF--PFRCKEV 249

Query: 29  WIEHQDYHN 3
           W  H D+ N
Sbjct: 250 WAYHPDFTN 258


>ref|XP_002467234.1| hypothetical protein SORBIDRAFT_01g021750 [Sorghum bicolor]
           gi|241921088|gb|EER94232.1| hypothetical protein
           SORBIDRAFT_01g021750 [Sorghum bicolor]
          Length = 426

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
 Frame = -2

Query: 413 IRDLANQTNNTPILIIGDLNIILSSDEKSG-GRPF---VHSDCQPTIDIIRDLALLDSGF 246
           + D      N P+  +GDLN I+  DEKSG GRP    ++S C    D +++   +D G+
Sbjct: 125 VHDFVVANTNMPMFCMGDLNNIMHPDEKSGPGRPDLRRINSFC----DSVKECGFIDLGY 180

Query: 245 KGYPFTWSNKRTTPDNIQKRLDRALNNSEWSLLFP*TMIYHLPATVSDHSPIPLNTQP*S 66
            G  +TW+NKR +     +RLDR L N+EW +++P T +YHLP   SDH+PI       +
Sbjct: 181 SGPAYTWTNKRFSTTPTFERLDRCLANAEWCMMYPRTTVYHLPMLRSDHTPILALLDSNT 240

Query: 65  HDFPKPFKFQHMWIEHQDY 9
           ++  KPF+F++ W+  QDY
Sbjct: 241 YNNTKPFRFENWWLMEQDY 259


>gb|EEC76821.1| hypothetical protein OsI_14959 [Oryza sativa Indica Group]
          Length = 405

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 51/120 (42%), Positives = 68/120 (56%)
 Frame = -2

Query: 368 IGDLNIILSSDEKSGGRPFVHSDCQPTIDIIRDLALLDSGFKGYPFTWSNKRTTPDNIQK 189
           +GDLN I+  +EK    P   S        I +L L+D G+ G  +TWSNK+   D + +
Sbjct: 1   MGDLNDIMYDNEKLSCSPVNSSRISQFPRHIHNLGLIDLGYNGPAYTWSNKKNGCDLVLE 60

Query: 188 RLDRALNNSEWSLLFP*TMIYHLPATVSDHSPIPLNTQP*SHDFPKPFKFQHMWIEHQDY 9
           RLDR L N EW +LFP T +YHLP   SDH+PI     P  H   K FKF++ WI  +D+
Sbjct: 61  RLDRCLANVEWCMLFPHTTVYHLPMLYSDHAPIIAILNPIHHHPKKSFKFENWWISEKDF 120


>ref|XP_002447531.1| hypothetical protein SORBIDRAFT_06g002845 [Sorghum bicolor]
           gi|241938714|gb|EES11859.1| hypothetical protein
           SORBIDRAFT_06g002845 [Sorghum bicolor]
          Length = 993

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/124 (37%), Positives = 69/124 (55%)
 Frame = -2

Query: 380 PILIIGDLNIILSSDEKSGGRPFVHSDCQPTIDIIRDLALLDSGFKGYPFTWSNKRTTPD 201
           PIL +GD+N +++++EK G             D ++    LD G+ G  +TW+NKR +  
Sbjct: 162 PILAMGDMNELMNANEKCGSGKADIRRINMFCDYVKQCGFLDLGYSGPAYTWTNKRFSTT 221

Query: 200 NIQKRLDRALNNSEWSLLFP*TMIYHLPATVSDHSPIPLNTQP*SHDFPKPFKFQHMWIE 21
              +RLDR L N+EW + +P T +YHLP   SDH+PI        H   K F+F++ W+ 
Sbjct: 222 PTFQRLDRCLANAEWCMAYPRTTVYHLPMRRSDHAPILTMLDSTRHHNNKIFRFKNWWLM 281

Query: 20  HQDY 9
            QDY
Sbjct: 282 EQDY 285


>ref|XP_002438569.1| hypothetical protein SORBIDRAFT_10g022040 [Sorghum bicolor]
           gi|241916792|gb|EER89936.1| hypothetical protein
           SORBIDRAFT_10g022040 [Sorghum bicolor]
          Length = 1088

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 45/135 (33%), Positives = 69/135 (51%)
 Frame = -2

Query: 413 IRDLANQTNNTPILIIGDLNIILSSDEKSGGRPFVHSDCQPTIDIIRDLALLDSGFKGYP 234
           IR       + P++ +GD+N I++  EK G RP           +++D    D G+ G  
Sbjct: 125 IRHFVMSNQDLPVICMGDMNNIMNVTEKLGPRPANQRLISNFCCLVKDCGFFDLGYHGPA 184

Query: 233 FTWSNKRTTPDNIQKRLDRALNNSEWSLLFP*TMIYHLPATVSDHSPIPLNTQP*SHDFP 54
           +TWSNKR +     +RLDR   N+EW   FP T ++HLP   SDH+PI            
Sbjct: 185 YTWSNKRFSSFPTYERLDRFFGNAEWCANFPNTSVFHLPMLYSDHAPILAVLNSVCRKAN 244

Query: 53  KPFKFQHMWIEHQDY 9
            PF+F++ W+  +D+
Sbjct: 245 HPFRFENWWLLTEDF 259


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