BLASTX nr result

ID: Coptis25_contig00035672 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035672
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vi...   115   3e-24
emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]   115   4e-24
ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267...   114   6e-24
ref|XP_002526659.1| transcription factor, putative [Ricinus comm...    94   1e-17
ref|XP_002323604.1| GRAS family transcription factor [Populus tr...    91   8e-17

>ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vinifera]
          Length = 490

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/92 (59%), Positives = 69/92 (75%)
 Frame = -2

Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216
           EARIAMECLF AP++SSL    KWEE+K G S + S+  LE W+ S+E+L +AK+MV+EG
Sbjct: 399 EARIAMECLFVAPHVSSLGWFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 458

Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120
            S Y VKIEG + NVM L WRG  +VRVS+WR
Sbjct: 459 ESKYGVKIEGNNMNVMVLEWRGAPLVRVSAWR 490


>emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera]
          Length = 535

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/92 (59%), Positives = 69/92 (75%)
 Frame = -2

Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216
           EARIAMECLF AP++SSL    KWEE+K G S + S+  LE W+ S+E+L +AK+MV+EG
Sbjct: 444 EARIAMECLFVAPHVSSLGRFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 503

Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120
            S Y VKIEG + NVM L WRG  +VRVS+WR
Sbjct: 504 ESKYGVKIEGNNMNVMVLEWRGAPLVRVSAWR 535


>ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera]
          Length = 1435

 Score =  114 bits (286), Expect = 6e-24
 Identities = 54/92 (58%), Positives = 69/92 (75%)
 Frame = -2

Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216
           EARIAMECLF AP++SSL    KWEE+K G S + S+  LE W+ S+E+L +AK+MV+EG
Sbjct: 579 EARIAMECLFVAPHVSSLGWFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 638

Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120
            S Y VKIEG + N+M L WRG  +VRVS+WR
Sbjct: 639 ESKYGVKIEGNNMNMMVLEWRGAPLVRVSAWR 670


>ref|XP_002526659.1| transcription factor, putative [Ricinus communis]
           gi|223533959|gb|EEF35681.1| transcription factor,
           putative [Ricinus communis]
          Length = 509

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/94 (51%), Positives = 64/94 (68%)
 Frame = -2

Query: 401 LTEARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVK 222
           L EAR+A+ECLF  P+ISS   + +W E+KE  + L+  T LE W+ S E+L +A+E VK
Sbjct: 416 LAEARMALECLFVTPFISSQAWIQRWMEMKECCN-LQMGTSLEGWRVSNESLEEARETVK 474

Query: 221 EGNSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120
           E  S+Y V+I G   N M L WRGT +VRVS+WR
Sbjct: 475 EKQSLYKVRIGGEWNNEMILEWRGTQLVRVSAWR 508


>ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222868234|gb|EEF05365.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 535

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 50/94 (53%), Positives = 62/94 (65%)
 Frame = -2

Query: 401 LTEARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVK 222
           LTEAR+A+ECLF APYISS     KW E+K+G + L+    LE W+ SR NL +A+EMV 
Sbjct: 442 LTEARMALECLFVAPYISSQDWYQKWVEMKQGCN-LELGNGLEGWRVSRVNLEEAREMVG 500

Query: 221 EGNSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120
              S Y VKI G   N M L W+ T +VRVS+WR
Sbjct: 501 GKQSSYGVKIGGDLGNEMILEWKSTPLVRVSTWR 534


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