BLASTX nr result
ID: Coptis25_contig00035672
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035672 (402 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vi... 115 3e-24 emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera] 115 4e-24 ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267... 114 6e-24 ref|XP_002526659.1| transcription factor, putative [Ricinus comm... 94 1e-17 ref|XP_002323604.1| GRAS family transcription factor [Populus tr... 91 8e-17 >ref|XP_003632599.1| PREDICTED: DELLA protein RGA2-like [Vitis vinifera] Length = 490 Score = 115 bits (289), Expect = 3e-24 Identities = 55/92 (59%), Positives = 69/92 (75%) Frame = -2 Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216 EARIAMECLF AP++SSL KWEE+K G S + S+ LE W+ S+E+L +AK+MV+EG Sbjct: 399 EARIAMECLFVAPHVSSLGWFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 458 Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120 S Y VKIEG + NVM L WRG +VRVS+WR Sbjct: 459 ESKYGVKIEGNNMNVMVLEWRGAPLVRVSAWR 490 >emb|CAN77496.1| hypothetical protein VITISV_025266 [Vitis vinifera] Length = 535 Score = 115 bits (288), Expect = 4e-24 Identities = 55/92 (59%), Positives = 69/92 (75%) Frame = -2 Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216 EARIAMECLF AP++SSL KWEE+K G S + S+ LE W+ S+E+L +AK+MV+EG Sbjct: 444 EARIAMECLFVAPHVSSLGRFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 503 Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120 S Y VKIEG + NVM L WRG +VRVS+WR Sbjct: 504 ESKYGVKIEGNNMNVMVLEWRGAPLVRVSAWR 535 >ref|XP_002267556.2| PREDICTED: uncharacterized protein LOC100267833 [Vitis vinifera] Length = 1435 Score = 114 bits (286), Expect = 6e-24 Identities = 54/92 (58%), Positives = 69/92 (75%) Frame = -2 Query: 395 EARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVKEG 216 EARIAMECLF AP++SSL KWEE+K G S + S+ LE W+ S+E+L +AK+MV+EG Sbjct: 579 EARIAMECLFVAPHVSSLGWFQKWEEMKGGDSNVDSILGLEGWRVSQESLMEAKQMVREG 638 Query: 215 NSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120 S Y VKIEG + N+M L WRG +VRVS+WR Sbjct: 639 ESKYGVKIEGNNMNMMVLEWRGAPLVRVSAWR 670 >ref|XP_002526659.1| transcription factor, putative [Ricinus communis] gi|223533959|gb|EEF35681.1| transcription factor, putative [Ricinus communis] Length = 509 Score = 94.0 bits (232), Expect = 1e-17 Identities = 48/94 (51%), Positives = 64/94 (68%) Frame = -2 Query: 401 LTEARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVK 222 L EAR+A+ECLF P+ISS + +W E+KE + L+ T LE W+ S E+L +A+E VK Sbjct: 416 LAEARMALECLFVTPFISSQAWIQRWMEMKECCN-LQMGTSLEGWRVSNESLEEARETVK 474 Query: 221 EGNSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120 E S+Y V+I G N M L WRGT +VRVS+WR Sbjct: 475 EKQSLYKVRIGGEWNNEMILEWRGTQLVRVSAWR 508 >ref|XP_002323604.1| GRAS family transcription factor [Populus trichocarpa] gi|222868234|gb|EEF05365.1| GRAS family transcription factor [Populus trichocarpa] Length = 535 Score = 91.3 bits (225), Expect = 8e-17 Identities = 50/94 (53%), Positives = 62/94 (65%) Frame = -2 Query: 401 LTEARIAMECLFFAPYISSLPCLGKWEEIKEGGSALKSVTELESWKFSRENLFQAKEMVK 222 LTEAR+A+ECLF APYISS KW E+K+G + L+ LE W+ SR NL +A+EMV Sbjct: 442 LTEARMALECLFVAPYISSQDWYQKWVEMKQGCN-LELGNGLEGWRVSRVNLEEAREMVG 500 Query: 221 EGNSMYSVKIEGMDENVMSLHWRGTSIVRVSSWR 120 S Y VKI G N M L W+ T +VRVS+WR Sbjct: 501 GKQSSYGVKIGGDLGNEMILEWKSTPLVRVSTWR 534