BLASTX nr result

ID: Coptis25_contig00035655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035655
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|2...   102   4e-20
emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]    97   1e-18
ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allerg...    94   1e-17
emb|CBI36903.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|NP_001238264.1| uncharacterized protein LOC100306656 [Glycin...    91   1e-16

>ref|XP_002328585.1| predicted protein [Populus trichocarpa] gi|222838567|gb|EEE76932.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  102 bits (253), Expect = 4e-20
 Identities = 47/87 (54%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPN-VKSVDFISGDGSPGSINQVNFV 83
           MG+ ++ +E  CP+S  RMF AL  D +NLIPK++P  VKSVD I GDG  GSI QVNF 
Sbjct: 1   MGVASYTQEFTCPISPARMFKALILDSNNLIPKLLPQIVKSVDLIHGDGGAGSIEQVNFT 60

Query: 82  DGHPVKFVKHRLDKRDAANYECNYTVI 2
           +G  +K+VKHR+D+ D  N  C YT+I
Sbjct: 61  EGTDIKYVKHRIDELDRVNLVCKYTMI 87


>emb|CAN83787.1| hypothetical protein VITISV_024511 [Vitis vinifera]
          Length = 1172

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 41/87 (47%), Positives = 59/87 (67%)
 Frame = -2

Query: 262  SMGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNVKSVDFISGDGSPGSINQVNFV 83
            +MG+ TF +E+  P++   MF AL  D H L+P +MP++KS++F+ GDG  GSI Q NF 
Sbjct: 1029 NMGVHTFTQEITTPIAPAXMFKALIVDSHXLVPTLMPSIKSIEFVEGDGGVGSIKQTNFP 1088

Query: 82   DGHPVKFVKHRLDKRDAANYECNYTVI 2
            +G   K++KHR+D  D  NY C YT+I
Sbjct: 1089 EGSHFKYLKHRIDAIDHDNYSCKYTLI 1115


>ref|XP_003632378.1| PREDICTED: LOW QUALITY PROTEIN: major allergen Pru ar 1-like [Vitis
           vinifera]
          Length = 204

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = -2

Query: 247 TFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNVKSVDFISGDGSPGSINQVNFVDGHPV 68
           +F++E+  P++   MF AL  D HNL+P +MP++KS++F+ GDG  GSI Q NF +G   
Sbjct: 52  SFSQEITTPIAPAIMFKALIVDSHNLVPTLMPSIKSIEFVEGDGGVGSIKQTNFPEGSHF 111

Query: 67  KFVKHRLDKRDAANYECNYTVI 2
           K++KHR+D  D  NY C YT+I
Sbjct: 112 KYLKHRIDAIDHDNYSCKYTLI 133


>emb|CBI36903.3| unnamed protein product [Vitis vinifera]
          Length = 163

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = -2

Query: 247 TFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNVKSVDFISGDGSPGSINQVNFVDGHPV 68
           +F++E+  P++   MF AL  D HNL+P +MP++KS++F+ GDG  GSI Q NF +G   
Sbjct: 52  SFSQEITTPIAPAIMFKALIVDSHNLVPTLMPSIKSIEFVEGDGGVGSIKQTNFPEGSHF 111

Query: 67  KFVKHRLDKRDAANYECNYTVI 2
           K++KHR+D  D  NY C YT+I
Sbjct: 112 KYLKHRIDAIDHDNYSCKYTLI 133


>ref|NP_001238264.1| uncharacterized protein LOC100306656 [Glycine max]
           gi|255629199|gb|ACU14944.1| unknown [Glycine max]
          Length = 160

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
 Frame = -2

Query: 259 MGIVTFNEELHCPVSAKRMFHALFEDDHNLIPKIMPNV-KSVDFISGDGSPGSINQVNFV 83
           MG  TF  +   PV+  RMF AL  D   L+PK++P + K V+ I GDG  GSI QVNF 
Sbjct: 1   MGATTFTHDYSSPVAPSRMFKALITDSRTLLPKLLPQIIKEVNLIQGDGEAGSIEQVNFA 60

Query: 82  DGHPVKFVKHRLDKRDAANYECNYTVI 2
           +  P K+VKHR+D+ D  N+ C YT+I
Sbjct: 61  EAFPFKYVKHRIDEVDKDNFVCKYTMI 87


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