BLASTX nr result

ID: Coptis25_contig00035634 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035634
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274362.2| PREDICTED: probable plastid-lipid-associated...   272   5e-71
ref|XP_004140490.1| PREDICTED: probable plastid-lipid-associated...   268   3e-70
ref|XP_002326822.1| predicted protein [Populus trichocarpa] gi|2...   268   7e-70
ref|NP_191914.1| putative plastid-lipid-associated protein 11 [A...   265   5e-69
ref|XP_002511641.1| structural molecule, putative [Ricinus commu...   261   9e-68

>ref|XP_002274362.2| PREDICTED: probable plastid-lipid-associated protein 11,
           chloroplastic-like [Vitis vinifera]
          Length = 219

 Score =  272 bits (695), Expect = 5e-71
 Identities = 141/213 (66%), Positives = 162/213 (76%), Gaps = 1/213 (0%)
 Frame = -3

Query: 637 LLPHFPFH*DFKTPSLKLINGANPPLYQHLHQPKT-KFFWQKNDLLDLISNEERGLKTQN 461
           LL H PF+     P+   +    P          T +    K  LL+LIS++ERGLKT N
Sbjct: 6   LLHHIPFNPQSPNPNPNSLKSHYPRSSTITCSTTTSEALSAKRHLLNLISDQERGLKTLN 65

Query: 460 NPSKLSKIIKAIEAMEVLGKNSVTTDSSLSATWKMLWTTEKEQLFIIKNASLFGTQTGDV 281
           NPSK S+I++AI+AM VLG+++VTT  SLSATW++LWTTEKEQLFII+ A LFGTQ GDV
Sbjct: 66  NPSKRSEIVEAIDAMAVLGQDTVTTGDSLSATWRLLWTTEKEQLFIIEKAPLFGTQAGDV 125

Query: 280 LQVIDVEKGVLNNVITFPPSGVFFVRSSIEIVSPQRVNFRFTSAVLRGESWEFPLPPFGQ 101
           LQVIDVEK VLNNVITFPPSGVFFVRS+IEI S +RVNFRFTSAVLRG+ WEFPLPPFGQ
Sbjct: 126 LQVIDVEKRVLNNVITFPPSGVFFVRSTIEIASSKRVNFRFTSAVLRGKDWEFPLPPFGQ 185

Query: 100 GWFESVYQDDEIRVVKDIRNDYLVVDRASYNWK 2
           GWFESVY D   RV KDIR DYLVV+RA Y WK
Sbjct: 186 GWFESVYLDSGFRVAKDIREDYLVVERAPYEWK 218


>ref|XP_004140490.1| PREDICTED: probable plastid-lipid-associated protein 11,
           chloroplastic-like [Cucumis sativus]
          Length = 213

 Score =  268 bits (685), Expect(2) = 3e-70
 Identities = 127/171 (74%), Positives = 149/171 (87%)
 Frame = -3

Query: 517 KNDLLDLISNEERGLKTQNNPSKLSKIIKAIEAMEVLGKNSVTTDSSLSATWKMLWTTEK 338
           K  LL LIS+++RGLKTQ NP KL+ I+K+I+ +  LG+NSVTTD SLSATW++LWTTEK
Sbjct: 41  KRQLLTLISDQQRGLKTQKNPQKLASIVKSIDHLASLGRNSVTTDDSLSATWRLLWTTEK 100

Query: 337 EQLFIIKNASLFGTQTGDVLQVIDVEKGVLNNVITFPPSGVFFVRSSIEIVSPQRVNFRF 158
           EQLFII+ A LFGT+ GDVLQVIDVEK  LNNVITFPP GVFFVRS+IE+ S QRVNFRF
Sbjct: 101 EQLFIIEKAHLFGTRAGDVLQVIDVEKKSLNNVITFPPDGVFFVRSNIEVASSQRVNFRF 160

Query: 157 TSAVLRGESWEFPLPPFGQGWFESVYQDDEIRVVKDIRNDYLVVDRASYNW 5
           TSAVLRG++WE PLPPFGQGWF++VY DDEIRVVKDIR DYL+V+RA Y+W
Sbjct: 161 TSAVLRGKNWEIPLPPFGQGWFDTVYLDDEIRVVKDIRGDYLIVERAPYSW 211



 Score = 23.5 bits (49), Expect(2) = 3e-70
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 654 IIPSSLSFHTSHFIKIS 604
           I PSS++ H SH  KIS
Sbjct: 13  IFPSSITSHLSHLPKIS 29


>ref|XP_002326822.1| predicted protein [Populus trichocarpa] gi|222835137|gb|EEE73572.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score =  268 bits (685), Expect = 7e-70
 Identities = 132/171 (77%), Positives = 148/171 (86%)
 Frame = -3

Query: 517 KNDLLDLISNEERGLKTQNNPSKLSKIIKAIEAMEVLGKNSVTTDSSLSATWKMLWTTEK 338
           K  LL LIS++ RGLKTQN+P K S II+AI+AM  LGK++VTTD SLSATW++LWTTEK
Sbjct: 1   KQHLLTLISDQHRGLKTQNDPIKRSSIIQAIDAMADLGKDTVTTDDSLSATWRLLWTTEK 60

Query: 337 EQLFIIKNASLFGTQTGDVLQVIDVEKGVLNNVITFPPSGVFFVRSSIEIVSPQRVNFRF 158
           EQLFII+ A LFGTQ GDVLQVIDVEK  LNNVITFPP GVFFVRSSIE+ S QRVNFRF
Sbjct: 61  EQLFIIEKAPLFGTQAGDVLQVIDVEKRTLNNVITFPPDGVFFVRSSIEVSSSQRVNFRF 120

Query: 157 TSAVLRGESWEFPLPPFGQGWFESVYQDDEIRVVKDIRNDYLVVDRASYNW 5
           TSAVLRG++WE PLPPFGQGWFES+Y D+EIRVVKDIR DYLVVD+A Y W
Sbjct: 121 TSAVLRGKNWEIPLPPFGQGWFESLYIDEEIRVVKDIRGDYLVVDKAPYAW 171


>ref|NP_191914.1| putative plastid-lipid-associated protein 11 [Arabidopsis thaliana]
           gi|75100154|sp|O81304.1|PAP11_ARATH RecName:
           Full=Probable plastid-lipid-associated protein 11,
           chloroplastic; AltName: Full=Fibrillin-11; Flags:
           Precursor gi|3193328|gb|AAC19310.1| F6N15.13 gene
           product [Arabidopsis thaliana]
           gi|7267090|emb|CAB80761.1| predicted protein of unknown
           function [Arabidopsis thaliana]
           gi|15809917|gb|AAL06886.1| AT4g00030/F6N15_13
           [Arabidopsis thaliana] gi|18377823|gb|AAL67098.1|
           AT4g00030/F6N15_13 [Arabidopsis thaliana]
           gi|332656416|gb|AEE81816.1| putative
           plastid-lipid-associated protein 11 [Arabidopsis
           thaliana]
          Length = 212

 Score =  265 bits (678), Expect = 5e-69
 Identities = 124/171 (72%), Positives = 145/171 (84%)
 Frame = -3

Query: 517 KNDLLDLISNEERGLKTQNNPSKLSKIIKAIEAMEVLGKNSVTTDSSLSATWKMLWTTEK 338
           K  LL+LIS E+RGL+TQ +P K  +I+ AIE+M V+G++S+TTD SLSATW++LWTTEK
Sbjct: 37  KRKLLELISEEDRGLRTQKDPKKRDEIVNAIESMTVIGRSSITTDDSLSATWRLLWTTEK 96

Query: 337 EQLFIIKNASLFGTQTGDVLQVIDVEKGVLNNVITFPPSGVFFVRSSIEIVSPQRVNFRF 158
           EQLFII+ A LFGT  GDVLQVIDV K +LNNVITFPP GVFFVRS I+I SPQRVNFRF
Sbjct: 97  EQLFIIEKAGLFGTTAGDVLQVIDVNKRILNNVITFPPDGVFFVRSDIDIASPQRVNFRF 156

Query: 157 TSAVLRGESWEFPLPPFGQGWFESVYQDDEIRVVKDIRNDYLVVDRASYNW 5
            SAVLRG++WE PLPPFG+GWFE+VY D EIRV KDIR DYL+VDRA YNW
Sbjct: 157 NSAVLRGKNWELPLPPFGKGWFENVYMDGEIRVAKDIRGDYLIVDRAPYNW 207


>ref|XP_002511641.1| structural molecule, putative [Ricinus communis]
           gi|223548821|gb|EEF50310.1| structural molecule,
           putative [Ricinus communis]
          Length = 217

 Score =  261 bits (667), Expect = 9e-68
 Identities = 135/206 (65%), Positives = 154/206 (74%), Gaps = 11/206 (5%)
 Frame = -3

Query: 586 LINGANPPLYQHLHQ--PKTKFFWQ---------KNDLLDLISNEERGLKTQNNPSKLSK 440
           L+   N P + H     PK K             K  LL LIS+++RGLKTQ +P K + 
Sbjct: 11  LLKPKNSPKFNHYFHTTPKPKITCSSIATQSQSAKQHLLTLISDQDRGLKTQKDPEKRAL 70

Query: 439 IIKAIEAMEVLGKNSVTTDSSLSATWKMLWTTEKEQLFIIKNASLFGTQTGDVLQVIDVE 260
           II+AI AM  LGK++VTTD+SLSATW++LWTTEKEQLFII+ A  FG+Q GDVLQVIDV 
Sbjct: 71  IIQAINAMAELGKDTVTTDNSLSATWRLLWTTEKEQLFIIEKAPFFGSQAGDVLQVIDVG 130

Query: 259 KGVLNNVITFPPSGVFFVRSSIEIVSPQRVNFRFTSAVLRGESWEFPLPPFGQGWFESVY 80
              LNNVITFPP GVFFVRS+IEI S QRVNFRFTSAVLRG+SWE PLPPFGQGWFESVY
Sbjct: 131 NMTLNNVITFPPDGVFFVRSNIEIASSQRVNFRFTSAVLRGKSWEIPLPPFGQGWFESVY 190

Query: 79  QDDEIRVVKDIRNDYLVVDRASYNWK 2
            DD+IRV KDIR DYLVVDRA Y W+
Sbjct: 191 VDDDIRVAKDIRGDYLVVDRAPYAWR 216


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