BLASTX nr result

ID: Coptis25_contig00035630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035630
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517908.1| conserved hypothetical protein [Ricinus comm...    68   9e-10
ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260...    67   2e-09
emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]    67   2e-09
ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago ...    64   1e-08
ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805...    64   2e-08

>ref|XP_002517908.1| conserved hypothetical protein [Ricinus communis]
           gi|223542890|gb|EEF44426.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/46 (67%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   VLEGRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 140
           V+EGRKIT++I+GFV KI++KEGN VAAVCAV+GYFAL  R    D
Sbjct: 123 VIEGRKITREIIGFVFKILLKEGNFVAAVCAVLGYFALVRRNYEAD 168


>ref|XP_002274122.1| PREDICTED: uncharacterized protein LOC100260881 [Vitis vinifera]
          Length = 182

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   VLEGRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 140
           V+EGR IT +I GFV+KI++KEGN+VAA+CAV+GYFAL  RR   D
Sbjct: 132 VVEGRMITAEITGFVLKILLKEGNVVAAICAVLGYFALVRRRGEVD 177


>emb|CAN70485.1| hypothetical protein VITISV_041712 [Vitis vinifera]
          Length = 179

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = +3

Query: 3   VLEGRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRSRDD 140
           V+EGR IT +I GFV+KI++KEGN+VAA+CAV+GYFAL  RR   D
Sbjct: 129 VVEGRMITAEITGFVLKILLKEGNVVAAICAVLGYFALVRRRGEVD 174


>ref|XP_003607460.1| hypothetical protein MTR_4g078240 [Medicago truncatula]
           gi|217071038|gb|ACJ83879.1| unknown [Medicago
           truncatula] gi|355508515|gb|AES89657.1| hypothetical
           protein MTR_4g078240 [Medicago truncatula]
           gi|388501324|gb|AFK38728.1| unknown [Medicago
           truncatula]
          Length = 167

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/43 (69%), Positives = 36/43 (83%)
 Frame = +3

Query: 3   VLEGRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGRRS 131
           V+EGRKIT +I  FVIKI++KEGN+VAAVCAV+GYF L  R S
Sbjct: 124 VVEGRKITGEIFSFVIKILLKEGNVVAAVCAVLGYFVLVRRNS 166


>ref|XP_003527430.1| PREDICTED: uncharacterized protein LOC100805467 [Glycine max]
          Length = 174

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 29/41 (70%), Positives = 36/41 (87%)
 Frame = +3

Query: 3   VLEGRKITKDIVGFVIKIVIKEGNIVAAVCAVIGYFALTGR 125
           V+EGRKITK+I GFV++ ++KEGN VAAVCAV+GYFAL  R
Sbjct: 120 VVEGRKITKEIFGFVMRTLLKEGNFVAAVCAVLGYFALVRR 160


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