BLASTX nr result

ID: Coptis25_contig00035628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035628
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25129.3| unnamed protein product [Vitis vinifera]              203   1e-50
ref|XP_002271890.1| PREDICTED: uncharacterized protein LOC100241...   203   1e-50
ref|XP_002892971.1| hypothetical protein ARALYDRAFT_889199 [Arab...   199   2e-49
ref|NP_173229.1| ethylene-dependent gravitropism-deficient and y...   198   4e-49
dbj|BAE98423.1| hypothetical protein [Arabidopsis thaliana]           198   4e-49

>emb|CBI25129.3| unnamed protein product [Vitis vinifera]
          Length = 456

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/132 (77%), Positives = 105/132 (79%)
 Frame = -3

Query: 439 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIAAXXXXXXXXXXXXXXX 260
           VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIA                
Sbjct: 325 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIATLLSFGTSLLLGIGGL 384

Query: 259 XXXXXXLAWGLFATFFRGGEEIPAKDEITPLGEDRYAWGLVLALICFLTLFPNSGGTFSS 80
                 LAWGLFATFFRGGEE+PA DEITPLG+DRYAWG VLALICFLTLFPN GGTFSS
Sbjct: 385 SGSVLCLAWGLFATFFRGGEEVPATDEITPLGDDRYAWGFVLALICFLTLFPNGGGTFSS 444

Query: 79  SFLNPPFFRGDL 44
           SF + PFFRGDL
Sbjct: 445 SFFSDPFFRGDL 456


>ref|XP_002271890.1| PREDICTED: uncharacterized protein LOC100241185 [Vitis vinifera]
           gi|147804805|emb|CAN73523.1| hypothetical protein
           VITISV_010704 [Vitis vinifera]
          Length = 579

 Score =  203 bits (517), Expect = 1e-50
 Identities = 102/132 (77%), Positives = 105/132 (79%)
 Frame = -3

Query: 439 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIAAXXXXXXXXXXXXXXX 260
           VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIA                
Sbjct: 448 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIATLLSFGTSLLLGIGGL 507

Query: 259 XXXXXXLAWGLFATFFRGGEEIPAKDEITPLGEDRYAWGLVLALICFLTLFPNSGGTFSS 80
                 LAWGLFATFFRGGEE+PA DEITPLG+DRYAWG VLALICFLTLFPN GGTFSS
Sbjct: 508 SGSVLCLAWGLFATFFRGGEEVPATDEITPLGDDRYAWGFVLALICFLTLFPNGGGTFSS 567

Query: 79  SFLNPPFFRGDL 44
           SF + PFFRGDL
Sbjct: 568 SFFSDPFFRGDL 579


>ref|XP_002892971.1| hypothetical protein ARALYDRAFT_889199 [Arabidopsis lyrata subsp.
           lyrata] gi|297338813|gb|EFH69230.1| hypothetical protein
           ARALYDRAFT_889199 [Arabidopsis lyrata subsp. lyrata]
          Length = 573

 Score =  199 bits (506), Expect = 2e-49
 Identities = 99/131 (75%), Positives = 105/131 (80%)
 Frame = -3

Query: 439 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIAAXXXXXXXXXXXXXXX 260
           VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQA+FGR+ AA               
Sbjct: 441 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRSTAAILSFTTSLLLGIGGL 500

Query: 259 XXXXXXLAWGLFATFFRGGEEIPAKDEITPLGEDRYAWGLVLALICFLTLFPNSGGTFSS 80
                 LAWGLFATFFRGGEE PAKDEITPLG+DR+AWG+VL LICFLTLFPNSGGTFS+
Sbjct: 501 SGSVLCLAWGLFATFFRGGEETPAKDEITPLGDDRFAWGIVLGLICFLTLFPNSGGTFST 560

Query: 79  SFLNPPFFRGD 47
           SF N PFFRGD
Sbjct: 561 SFFNGPFFRGD 571


>ref|NP_173229.1| ethylene-dependent gravitropism-deficient and yellow-green-like 3
           protein [Arabidopsis thaliana]
           gi|9665065|gb|AAF97267.1|AC034106_10 F2H15.10
           [Arabidopsis thaliana] gi|332191525|gb|AEE29646.1|
           ethylene-dependent gravitropism-deficient and
           yellow-green-like 3 protein [Arabidopsis thaliana]
          Length = 573

 Score =  198 bits (503), Expect = 4e-49
 Identities = 98/131 (74%), Positives = 105/131 (80%)
 Frame = -3

Query: 439 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIAAXXXXXXXXXXXXXXX 260
           VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQA+FGR+ AA               
Sbjct: 441 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRSTAAILSFTTSLLLGIGGL 500

Query: 259 XXXXXXLAWGLFATFFRGGEEIPAKDEITPLGEDRYAWGLVLALICFLTLFPNSGGTFSS 80
                 LAWGLFATFFRGGEE PAKDEITP+G+DR+AWG+VL LICFLTLFPNSGGTFS+
Sbjct: 501 SGSVLCLAWGLFATFFRGGEETPAKDEITPVGDDRFAWGIVLGLICFLTLFPNSGGTFST 560

Query: 79  SFLNPPFFRGD 47
           SF N PFFRGD
Sbjct: 561 SFFNGPFFRGD 571


>dbj|BAE98423.1| hypothetical protein [Arabidopsis thaliana]
          Length = 573

 Score =  198 bits (503), Expect = 4e-49
 Identities = 98/131 (74%), Positives = 105/131 (80%)
 Frame = -3

Query: 439 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQALFGRNIAAXXXXXXXXXXXXXXX 260
           VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQA+FGR+ AA               
Sbjct: 441 VGVPVDPLAFAGLLGMVVTSLNLLPCGRLEGGRIAQAMFGRSTAAILSFTTSLLLGIGGL 500

Query: 259 XXXXXXLAWGLFATFFRGGEEIPAKDEITPLGEDRYAWGLVLALICFLTLFPNSGGTFSS 80
                 LAWGLFATFFRGGEE PAKDEITP+G+DR+AWG+VL LICFLTLFPNSGGTFS+
Sbjct: 501 SGSVLCLAWGLFATFFRGGEETPAKDEITPVGDDRFAWGIVLGLICFLTLFPNSGGTFST 560

Query: 79  SFLNPPFFRGD 47
           SF N PFFRGD
Sbjct: 561 SFFNGPFFRGD 571


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