BLASTX nr result

ID: Coptis25_contig00035621 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035621
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrol...   160   8e-38
ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263...   156   2e-36
emb|CBI26140.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35

>ref|XP_002336153.1| predicted protein [Populus trichocarpa] gi|222874439|gb|EEF11570.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/138 (59%), Positives = 105/138 (76%), Gaps = 2/138 (1%)
 Frame = -2

Query: 439 SSFPQMIESLKFKGK-TPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY 263
           SSFP+++ SL+ K K TPE +F R+LLSRLYRL++ HHRYHHMD FLGEILGAV+L GD+
Sbjct: 65  SSFPKILRSLRSKTKRTPEELFVRRLLSRLYRLKETHHRYHHMDTFLGEILGAVVLAGDH 124

Query: 262 -ELKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQ 86
            +L+P    KP+T+LA G+   DGQ+ IDE+ G+ VKI+ESV P A+Y  FA+    K Q
Sbjct: 125 SKLEPIWLAKPITILAEGDESKDGQVVIDEKQGKFVKILESVEPEAHYDLFAKQLTVKKQ 184

Query: 85  SAVIGSFDEQKRIWSMPP 32
           SAV+GSF EQ+RIW  PP
Sbjct: 185 SAVVGSFGEQRRIWGAPP 202


>ref|XP_002516835.1| inosine-uridine preferring nucleoside hydrolase, putative [Ricinus
            communis] gi|223543923|gb|EEF45449.1| inosine-uridine
            preferring nucleoside hydrolase, putative [Ricinus
            communis]
          Length = 885

 Score =  160 bits (406), Expect = 8e-38
 Identities = 82/144 (56%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
 Frame = -2

Query: 439  SSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE 260
            SSF ++++SL    KTPEA+FAR+LLSRLYRL + HHRYHHMD FLGEILGAV LGG ++
Sbjct: 745  SSFSKILQSLSKTNKTPEALFARRLLSRLYRLHQAHHRYHHMDTFLGEILGAVSLGGGHD 804

Query: 259  --LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQ 86
              L    ++K + VLA G    +G+I +DE+ G+ V++++SV+P  YY HFA   G K+Q
Sbjct: 805  SLLNSILKIKRIKVLAEGVESREGEIVVDEKQGKLVRLLDSVDPTVYYNHFAWQLGVKMQ 864

Query: 85   SAVIGSFDEQKRIWSMPPTETNSK 14
            SAVIGSFDEQ+RIWS   T+ NSK
Sbjct: 865  SAVIGSFDEQRRIWS---TKPNSK 885


>ref|XP_002277102.1| PREDICTED: uncharacterized protein LOC100263026 [Vitis vinifera]
          Length = 1054

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 439  SSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE 260
            SSFP++IE L    KTPEA+FAR+LLS L+ LQ+KHHRY HM  FLGEILGAV+L  D+ 
Sbjct: 911  SSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEKHHRYRHMHTFLGEILGAVVLADDHS 970

Query: 259  -LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQS 83
             L  + + KP+ + ATG+   DGQ+ IDE+ G+ VK++  VNP AYY   A   G K QS
Sbjct: 971  FLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLVKLLRRVNPKAYYDLLANRLGDKKQS 1030

Query: 82   AVIGSFDEQKRIWSMPPTETNSKS 11
            AVI SF+EQKRIW+ PP  T + S
Sbjct: 1031 AVIASFEEQKRIWTTPPNRTETSS 1054


>emb|CBI26140.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  156 bits (394), Expect = 2e-36
 Identities = 80/144 (55%), Positives = 101/144 (70%), Gaps = 1/144 (0%)
 Frame = -2

Query: 439  SSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDYE 260
            SSFP++IE L    KTPEA+FAR+LLS L+ LQ+KHHRY HM  FLGEILGAV+L  D+ 
Sbjct: 750  SSFPKIIERLCQTKKTPEALFARRLLSTLHHLQEKHHRYRHMHTFLGEILGAVVLADDHS 809

Query: 259  -LKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQS 83
             L  + + KP+ + ATG+   DGQ+ IDE+ G+ VK++  VNP AYY   A   G K QS
Sbjct: 810  FLNATFKSKPIKLYATGDESMDGQLAIDEKQGKLVKLLRRVNPKAYYDLLANRLGDKKQS 869

Query: 82   AVIGSFDEQKRIWSMPPTETNSKS 11
            AVI SF+EQKRIW+ PP  T + S
Sbjct: 870  AVIASFEEQKRIWTTPPNRTETSS 893


>ref|XP_002336154.1| predicted protein [Populus trichocarpa] gi|222874440|gb|EEF11571.1|
            predicted protein [Populus trichocarpa]
          Length = 872

 Score =  152 bits (384), Expect = 3e-35
 Identities = 81/143 (56%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
 Frame = -2

Query: 439  SSFPQMIESLKFKGKTPEAMFARQLLSRLYRLQKKHHRYHHMDIFLGEILGAVMLGGDY- 263
            SSFP+++E L+    TPEA+FA++LLSRLY L++ H RY  MD FLGEILGAV+L G++ 
Sbjct: 725  SSFPEILERLRKINTTPEALFAQRLLSRLYHLKETHRRYQQMDTFLGEILGAVVLAGNFS 784

Query: 262  ELKPSSQVKPLTVLATGNIMTDGQIFIDEQHGRAVKIIESVNPMAYYGHFAELFGSKVQS 83
            +L P+ +VKP+ VLA G    DG+I IDE+ GR VKI+E V+  AYY  F E   SK QS
Sbjct: 785  KLDPTFRVKPIKVLAEGVESEDGRIVIDEKQGRLVKIVEKVDLGAYYDLFTEQLRSKEQS 844

Query: 82   AVIGSFDEQKRIWSMPPTETNSK 14
            AVIGSFDEQ+R WS+P   T  K
Sbjct: 845  AVIGSFDEQRRNWSVPLNLTKGK 867


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