BLASTX nr result

ID: Coptis25_contig00035620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035620
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC64184.1| endopolygalacturonase [Prunus persica] gi|3377301...   139   2e-31
gb|ABC72325.1| endo-polygalacturonase [Prunus persica] gi|110293...   139   2e-31
gb|ABV32553.1| endopolygalacturonase [Prunus persica]                 139   2e-31
gb|AAP21999.1| endopolygalacturonase [Prunus persica]                 139   2e-31
ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalactur...   138   5e-31

>gb|AAC64184.1| endopolygalacturonase [Prunus persica] gi|337730173|gb|AEI70577.1|
           endo-polygalacturonase [Prunus persica]
           gi|337730175|gb|AEI70578.1| endo-polygalacturonase
           [Prunus persica] gi|337730177|gb|AEI70579.1|
           endo-polygalacturonase [Prunus persica]
           gi|337730179|gb|AEI70580.1| endo-polygalacturonase
           [Prunus persica]
          Length = 393

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = -3

Query: 240 GVTIMSSGIKTGDDCISIGPGTSKLWIEGIACGPGHGISIGSLAKDLDEPGVQDVTVKSV 61
           GVTI++S I TGDDC+SIGPGTS LWIEG+ACGPGHGISIGSL K+ +E GVQ+VTVK+V
Sbjct: 207 GVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTV 266

Query: 60  VFTGTQNGLRIKAWGRPSNG 1
            FTGTQNGLRIK+WGRPS G
Sbjct: 267 TFTGTQNGLRIKSWGRPSTG 286


>gb|ABC72325.1| endo-polygalacturonase [Prunus persica] gi|110293961|gb|ABG66442.1|
           endo-polygalactoronase [Prunus persica]
           gi|337730171|gb|AEI70576.1| endo-polygalacturonase
           [Prunus persica]
          Length = 393

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = -3

Query: 240 GVTIMSSGIKTGDDCISIGPGTSKLWIEGIACGPGHGISIGSLAKDLDEPGVQDVTVKSV 61
           GVTI++S I TGDDC+SIGPGTS LWIEG+ACGPGHGISIGSL K+ +E GVQ+VTVK+V
Sbjct: 207 GVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTV 266

Query: 60  VFTGTQNGLRIKAWGRPSNG 1
            FTGTQNGLRIK+WGRPS G
Sbjct: 267 TFTGTQNGLRIKSWGRPSTG 286


>gb|ABV32553.1| endopolygalacturonase [Prunus persica]
          Length = 393

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = -3

Query: 240 GVTIMSSGIKTGDDCISIGPGTSKLWIEGIACGPGHGISIGSLAKDLDEPGVQDVTVKSV 61
           GVTI++S I TGDDC+SIGPGTS LWIEG+ACGPGHGISIGSL K+ +E GVQ+VTVK+V
Sbjct: 207 GVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTV 266

Query: 60  VFTGTQNGLRIKAWGRPSNG 1
            FTGTQNGLRIK+WGRPS G
Sbjct: 267 TFTGTQNGLRIKSWGRPSTG 286


>gb|AAP21999.1| endopolygalacturonase [Prunus persica]
          Length = 352

 Score =  139 bits (350), Expect = 2e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = -3

Query: 240 GVTIMSSGIKTGDDCISIGPGTSKLWIEGIACGPGHGISIGSLAKDLDEPGVQDVTVKSV 61
           GVTI++S I TGDDC+SIGPGTS LWIEG+ACGPGHGISIGSL K+ +E GVQ+VTVK+V
Sbjct: 178 GVTILNSKIATGDDCVSIGPGTSNLWIEGVACGPGHGISIGSLGKEQEEAGVQNVTVKTV 237

Query: 60  VFTGTQNGLRIKAWGRPSNG 1
            FTGTQNGLRIK+WGRPS G
Sbjct: 238 TFTGTQNGLRIKSWGRPSTG 257


>ref|XP_003556683.1| PREDICTED: LOW QUALITY PROTEIN: polygalacturonase-like [Glycine
           max]
          Length = 399

 Score =  138 bits (347), Expect = 5e-31
 Identities = 62/79 (78%), Positives = 71/79 (89%)
 Frame = -3

Query: 237 VTIMSSGIKTGDDCISIGPGTSKLWIEGIACGPGHGISIGSLAKDLDEPGVQDVTVKSVV 58
           +TI++S I+TGDDCIS+GPGT+ LWIE IACGPGHGISIGSL KDL E GVQ+VTVK+V 
Sbjct: 214 ITILNSKIRTGDDCISVGPGTTNLWIENIACGPGHGISIGSLGKDLKEAGVQNVTVKTVT 273

Query: 57  FTGTQNGLRIKAWGRPSNG 1
           FTGTQNG+RIK WGRPSNG
Sbjct: 274 FTGTQNGVRIKTWGRPSNG 292


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