BLASTX nr result

ID: Coptis25_contig00035568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035568
         (607 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003601531.1| hypothetical protein MTR_3g082720 [Medicago ...    94   2e-17
ref|XP_003605254.1| hypothetical protein MTR_4g027190 [Medicago ...    91   2e-16
ref|XP_003601533.1| hypothetical protein MTR_3g082740 [Medicago ...    91   2e-16
ref|XP_002532208.1| conserved hypothetical protein [Ricinus comm...    90   3e-16
ref|XP_003619111.1| hypothetical protein MTR_6g042090 [Medicago ...    80   3e-13

>ref|XP_003601531.1| hypothetical protein MTR_3g082720 [Medicago truncatula]
           gi|355490579|gb|AES71782.1| hypothetical protein
           MTR_3g082720 [Medicago truncatula]
          Length = 685

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 19/213 (8%)
 Frame = +3

Query: 24  DPTLSLFTEISREKHEMASQCSVRIPKEVGLTCDNSTSHNRTPDSSGDTKKQLILFESRS 203
           DP ++ F EI+R + E  S   + +    G+   N T            + Q    + R+
Sbjct: 199 DPAVASFLEITRRRIESQSGQEMVVYCNTGIEAKNHTEIKTKSKMGYFERMQKFQAKRRA 258

Query: 204 -RSTMGTNSFKHCTPRTFKGWRTDRVKWTV------------------PDEDLQGNHVSM 326
            RS +GT S +            +  K +V                  P+  L    V  
Sbjct: 259 KRSVLGTRSSEGAKQTVLGASSPEGAKRSVLGASSTEGAKRSVLGASSPEVGL----VED 314

Query: 327 KDLTEQLSSHCMLIENLEKDLSPSAVVDFLKKRASLTCQAVVLPSLSSESYARGILVVGC 506
           K+L  + +   +L+ NL+K L PS  V+FL K   ++    + PSLSSE Y RG +++  
Sbjct: 315 KELKGKRNVCMILMGNLDKQLCPSTAVEFLYKHTQVSASVFIFPSLSSEIYTRGAIMLRT 374

Query: 507 QEEFQKLSEFLDNPAHIILSSRGRPWVITEKKL 605
           + +FQKL +FL NP HII SS GRPWVI EK++
Sbjct: 375 ERDFQKLCDFLTNPKHIITSSTGRPWVIIEKQV 407


>ref|XP_003605254.1| hypothetical protein MTR_4g027190 [Medicago truncatula]
           gi|355506309|gb|AES87451.1| hypothetical protein
           MTR_4g027190 [Medicago truncatula]
          Length = 307

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
 Frame = +3

Query: 24  DPTLSLFTEISREKHEMASQCSVRIPKEVGLTCDNSTSHNRTPDSSGDTKKQLILFESRS 203
           DP ++ F EI+R + E  S       +E+ + C   T   +T    G  ++         
Sbjct: 70  DPAVAFFLEITRRRLESQSG------QELVVNCHKGT---KTKTKMGFFERMQKGKRRAK 120

Query: 204 RSTMGTNSFKHCTPRTFKGWRTDRVKWTVPDEDLQGNHVSMKDLTEQLSSHCM-LIENLE 380
           RS +G      C+P          +  ++ D++L+G             + CM LI NL+
Sbjct: 121 RSVVGA-----CSPEV-------SLDESMEDKELEGKR-----------NVCMILIGNLD 157

Query: 381 KDLSPSAVVDFLKKRASLTCQAVVLPSLSSESYARGILVVGCQEEFQKLSEFLDNPAHII 560
           K+L PS  V+F+ K   ++    + PSLS E Y RG +++  +++FQKL +FL NP +II
Sbjct: 158 KELCPSTAVEFIYKHTQVSASVFIFPSLSLELYTRGAIMLHTEQDFQKLCDFLTNPNYII 217

Query: 561 LSSRGRPWVITEKKL 605
            SS GRPWV+ EK++
Sbjct: 218 ASSTGRPWVVIEKQV 232


>ref|XP_003601533.1| hypothetical protein MTR_3g082740 [Medicago truncatula]
           gi|355490581|gb|AES71784.1| hypothetical protein
           MTR_3g082740 [Medicago truncatula]
          Length = 294

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 1/195 (0%)
 Frame = +3

Query: 24  DPTLSLFTEISREKHEMASQCSVRIPKEVGLTCDNSTSHNRTPDSSGDTKKQLILFESRS 203
           DP ++ F EI+R + E  S       +E+ + C   T   +T    G  ++         
Sbjct: 57  DPAVAFFLEITRRRLESQSG------QELVVNCHKGT---KTKTKMGFFERMQKGKRRAK 107

Query: 204 RSTMGTNSFKHCTPRTFKGWRTDRVKWTVPDEDLQGNHVSMKDLTEQLSSHCM-LIENLE 380
           RS +G      C+P          +  ++ D++L+G             + CM LI NL+
Sbjct: 108 RSVVGA-----CSPEV-------SLDESMEDKELEGKR-----------NVCMILIGNLD 144

Query: 381 KDLSPSAVVDFLKKRASLTCQAVVLPSLSSESYARGILVVGCQEEFQKLSEFLDNPAHII 560
           K+L PS  V+F+ K   ++    + PSLS E Y RG +++  +++FQKL +FL NP +II
Sbjct: 145 KELCPSTAVEFIYKHTQVSASVFIFPSLSLELYTRGAIMLHTEQDFQKLCDFLTNPNYII 204

Query: 561 LSSRGRPWVITEKKL 605
            SS GRPWV+ EK++
Sbjct: 205 ASSTGRPWVVIEKQV 219


>ref|XP_002532208.1| conserved hypothetical protein [Ricinus communis]
           gi|223528104|gb|EEF30177.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/82 (50%), Positives = 59/82 (71%)
 Frame = +3

Query: 354 HCMLIENLEKDLSPSAVVDFLKKRASLTCQAVVLPSLSSESYARGILVVGCQEEFQKLSE 533
           +  L++NL+K LSPS +++F+ +   ++ +A V PSLSSE+Y  G +VV  ++ FQKLSE
Sbjct: 209 YIFLVDNLDKSLSPSTIMEFIHRLTLVSVRAYVFPSLSSETYTNGAVVVEGEKNFQKLSE 268

Query: 534 FLDNPAHIILSSRGRPWVITEK 599
           F D+P HII+S  GRPW IT K
Sbjct: 269 FFDSPDHIIMSRGGRPWAITAK 290


>ref|XP_003619111.1| hypothetical protein MTR_6g042090 [Medicago truncatula]
           gi|355494126|gb|AES75329.1| hypothetical protein
           MTR_6g042090 [Medicago truncatula]
          Length = 460

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 56/193 (29%), Positives = 93/193 (48%)
 Frame = +3

Query: 27  PTLSLFTEISREKHEMASQCSVRIPKEVGLTCDNSTSHNRTPDSSGDTKKQLILFESRSR 206
           P ++ F EI+R + E  S       +E+   C   T   +T    G  ++     +   R
Sbjct: 160 PAVASFLEITRRRIESKSG------QELVADCHTGT---KTKTKMGFFERMEKGKQRAKR 210

Query: 207 STMGTNSFKHCTPRTFKGWRTDRVKWTVPDEDLQGNHVSMKDLTEQLSSHCMLIENLEKD 386
           S +G++S                     P+E ++      K+L  + +   +LI N++K+
Sbjct: 211 SVLGSSS---------------------PEESMED-----KELEGKRNVCMILIGNVDKE 244

Query: 387 LSPSAVVDFLKKRASLTCQAVVLPSLSSESYARGILVVGCQEEFQKLSEFLDNPAHIILS 566
           L PS  V+FL K   ++    + PSLS E Y RG ++   +++FQKL +FL    +II S
Sbjct: 245 LCPSTAVEFLYKHTQVSASIFIFPSLSFEIYTRGAIMTHTEQDFQKLCDFLTEQNYIITS 304

Query: 567 SRGRPWVITEKKL 605
           S GRPWV+ EK++
Sbjct: 305 STGRPWVVIEKQV 317


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