BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035567
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|2...   172   2e-41
ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containi...   161   6e-38
ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containi...   159   2e-37

>ref|XP_002330058.1| predicted protein [Populus trichocarpa] gi|222871483|gb|EEF08614.1|
           predicted protein [Populus trichocarpa]
          Length = 568

 Score =  172 bits (437), Expect = 2e-41
 Identities = 74/111 (66%), Positives = 100/111 (90%)
 Frame = +3

Query: 3   PDDVTFIGILSACSYTGRVEDGMKFFESMRLKYSVEPTAEHYACVVDLLGRAGLVHKALN 182
           PD++TFIG+LSACSYTG+V++G++ FESM+ KY V+P  EHYAC+VDLLGRAG +++A+N
Sbjct: 296 PDEITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAGKLNEAMN 355

Query: 183 MIENMPIQADDVIWGALLGACRMHMNMEVAEVAARKLVQLEPQNAGHYILL 335
           +IENMP++AD ++WGALLGACR H N+++AE+AA+KL+QLEP NAG YILL
Sbjct: 356 LIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAGPYILL 406


>ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  170 bits (431), Expect = 1e-40
 Identities = 77/110 (70%), Positives = 98/110 (89%)
 Frame = +3

Query: 6   DDVTFIGILSACSYTGRVEDGMKFFESMRLKYSVEPTAEHYACVVDLLGRAGLVHKALNM 185
           D VTF+G+LSACSYTG+V++G++ FESM+ KY VEP  EHYAC+VDLLGRAGLV+ A+++
Sbjct: 430 DGVTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDL 489

Query: 186 IENMPIQADDVIWGALLGACRMHMNMEVAEVAARKLVQLEPQNAGHYILL 335
           I+ MP++AD +IWGALLGACR HMNM +AEVAA+KL+QLEP+NAG YILL
Sbjct: 490 IQKMPVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILL 539


>ref|XP_002319471.1| predicted protein [Populus trichocarpa] gi|222857847|gb|EEE95394.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  164 bits (414), Expect = 9e-39
 Identities = 70/111 (63%), Positives = 97/111 (87%)
 Frame = +3

Query: 3   PDDVTFIGILSACSYTGRVEDGMKFFESMRLKYSVEPTAEHYACVVDLLGRAGLVHKALN 182
           PD++TFIG+LSAC YTG+V++G++ FESM+ KY V+   EHYAC+VDLLGRAG +++A+N
Sbjct: 429 PDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNEAMN 488

Query: 183 MIENMPIQADDVIWGALLGACRMHMNMEVAEVAARKLVQLEPQNAGHYILL 335
           +IENMP++AD ++WGALL ACR H N+++AE+AA+KL+QLEP +AG YILL
Sbjct: 489 LIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILL 539


>ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  161 bits (407), Expect = 6e-38
 Identities = 70/111 (63%), Positives = 94/111 (84%)
 Frame = +3

Query: 3   PDDVTFIGILSACSYTGRVEDGMKFFESMRLKYSVEPTAEHYACVVDLLGRAGLVHKALN 182
           PDDVTFIG+LSACSY+G+V++G++ FE+M+ KY VEP  EHYAC+VDLLGRA  V++A+ 
Sbjct: 437 PDDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMK 496

Query: 183 MIENMPIQADDVIWGALLGACRMHMNMEVAEVAARKLVQLEPQNAGHYILL 335
           ++E MP++ D ++WGALLGACR HM +++AEVA  KL QLEP+NAG Y+LL
Sbjct: 497 LVEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLL 547


>ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/111 (64%), Positives = 94/111 (84%)
 Frame = +3

Query: 3   PDDVTFIGILSACSYTGRVEDGMKFFESMRLKYSVEPTAEHYACVVDLLGRAGLVHKALN 182
           PDDVTF+G+LSACSYTG V+ G++ F SM  KY VE   EHYAC+VDLLGRAG +++A++
Sbjct: 511 PDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMD 570

Query: 183 MIENMPIQADDVIWGALLGACRMHMNMEVAEVAARKLVQLEPQNAGHYILL 335
           +IE MP++AD +IWGALLGACR HM +++AEVAA+KL+ LEP+NAG +ILL
Sbjct: 571 LIEKMPMEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILL 621