BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035558
         (295 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524067.1| conserved hypothetical protein [Ricinus comm...    79   3e-13
ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
ref|XP_004161304.1| PREDICTED: trafficking protein particle comp...    77   1e-12
ref|XP_004136715.1| PREDICTED: trafficking protein particle comp...    77   1e-12
ref|NP_001190319.1| uncharacterized protein [Arabidopsis thalian...    73   3e-11

>ref|XP_002524067.1| conserved hypothetical protein [Ricinus communis]
           gi|223536635|gb|EEF38277.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1284

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 36/51 (70%), Positives = 45/51 (88%)
 Frame = +3

Query: 141 SSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDV 293
           +S+ LGKML+EEITPVVMV+ TPLVE++C  NGLSFV+++ PFCNF NIDV
Sbjct: 4   ASTPLGKMLMEEITPVVMVLRTPLVEEACIKNGLSFVEMLSPFCNFSNIDV 54


>ref|XP_002323381.1| predicted protein [Populus trichocarpa] gi|222868011|gb|EEF05142.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/56 (66%), Positives = 47/56 (83%)
 Frame = +3

Query: 126 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDV 293
           MD A +S  LGKML+EEITPVVMV+ TPLVE+SC  N LSF++++ PFC+F+NIDV
Sbjct: 1   MDPAKTS--LGKMLLEEITPVVMVLRTPLVEESCLKNSLSFIEMLSPFCDFNNIDV 54


>ref|XP_004161304.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Cucumis sativus]
          Length = 650

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/56 (62%), Positives = 46/56 (82%)
 Frame = +3

Query: 126 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDV 293
           MD A +   LGKML+EEITPV+MV+ TPLVE++C  NG SF+Q++ PFC+F+NIDV
Sbjct: 1   MDPANTP--LGKMLLEEITPVIMVLNTPLVEEACLKNGFSFIQMLSPFCSFNNIDV 54


>ref|XP_004136715.1| PREDICTED: trafficking protein particle complex subunit 8-like
           [Cucumis sativus]
          Length = 1288

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 35/56 (62%), Positives = 46/56 (82%)
 Frame = +3

Query: 126 MDAATSSSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDV 293
           MD A +   LGKML+EEITPV+MV+ TPLVE++C  NG SF+Q++ PFC+F+NIDV
Sbjct: 1   MDPANTP--LGKMLLEEITPVIMVLNTPLVEEACLKNGFSFIQMLSPFCSFNNIDV 54


>ref|NP_001190319.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332004886|gb|AED92269.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 1244

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/50 (68%), Positives = 42/50 (84%)
 Frame = +3

Query: 144 SSYLGKMLIEEITPVVMVITTPLVEQSCQTNGLSFVQLVQPFCNFDNIDV 293
           +S LGKML+EEI+PVVMV+ TPLVE +   NGLSFV+ ++PFCNF NIDV
Sbjct: 6   NSSLGKMLLEEISPVVMVLCTPLVEDTFLRNGLSFVETLKPFCNFSNIDV 55