BLASTX nr result

ID: Coptis25_contig00035541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035541
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267602.2| PREDICTED: N-lysine methyltransferase setd6-...   250   4e-64
ref|XP_003555540.1| PREDICTED: ribosomal N-lysine methyltransfer...   239   8e-61
ref|XP_002306017.1| SET domain-containing protein [Populus trich...   231   2e-58
ref|XP_003622367.1| SET domain-containing protein [Medicago trun...   231   3e-58
ref|XP_002876372.1| SET domain-containing protein [Arabidopsis l...   231   3e-58

>ref|XP_002267602.2| PREDICTED: N-lysine methyltransferase setd6-like [Vitis vinifera]
            gi|296084825|emb|CBI27707.3| unnamed protein product
            [Vitis vinifera]
          Length = 500

 Score =  250 bits (639), Expect = 4e-64
 Identities = 149/307 (48%), Positives = 193/307 (62%), Gaps = 4/307 (1%)
 Frame = -3

Query: 1055 ENVHFTSVSSPLSNTDNDSDAEDNEYINNHHDESTEHLSTCKNGSPAALGGKNISESNDI 876
            ENVHFT+    LS+ D+D+D ++N+  NN  D                   +N  +  ++
Sbjct: 211  ENVHFTT---ELSHGDSDNDTDNNDEGNNMSDNKPLP--------------QNSFDDGNL 253

Query: 875  ELSSNSEEDSDHLEMIIVKDVKAGDEVFNTYGSMGNAALLHRYGFTELDNPFDIVNIELN 696
            E  S    DS  LE IIVK VKAGDEVFNTYGSMGNA LLHRYGFTE DNP DIVNI+L 
Sbjct: 254  EDPSYLGNDSMILETIIVKSVKAGDEVFNTYGSMGNAGLLHRYGFTEPDNPNDIVNIDLE 313

Query: 695  MVXXXXXXXXXXXXXXXXXSMWRRIGYCGCVSQNSEYFEISSDGEPQYELLILLHIIFLT 516
            +V                 S+WRR+ Y GCVSQNSEYFEISS+GEP+ ELLILL+I+ L 
Sbjct: 314  LVLHWSSALFSGRHSRGRLSLWRRLDYHGCVSQNSEYFEISSNGEPEIELLILLYIMLLP 373

Query: 515  DEVYDKLNQTVPSTGNLDKDVGILLLHKNTKRIPL-EIPDMAKNYLLTDNVCGALVSLAD 339
            +E Y+KL+  V + GNL++    +++      IP  +  +++K  LLT +VC AL++LAD
Sbjct: 374  EEAYNKLDLIVSTAGNLNE----MVISLERGMIPFGKTSEISKELLLTKSVCDALLALAD 429

Query: 338  IRESFYRLNSLRDDIQSLSSCCVRDRKLYHSMVLRVKERKILNNLRAY---ASSRSHKYK 168
             RES Y  NS+ DDI +L SCC+ D+KLYHS++LRV ER IL  LR Y   A++RSH   
Sbjct: 430  ARESLYGSNSV-DDIDALRSCCISDQKLYHSLMLRVSERMILKKLRTYAATAAARSHPTA 488

Query: 167  KRAVLRK 147
            K  + RK
Sbjct: 489  KGTLSRK 495


>ref|XP_003555540.1| PREDICTED: ribosomal N-lysine methyltransferase 3-like [Glycine max]
          Length = 506

 Score =  239 bits (610), Expect = 8e-61
 Identities = 139/290 (47%), Positives = 183/290 (63%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1055 ENVHFTSVSSPLSNTDNDSDAEDNEYINNHHDESTEHLSTCKNGSPAALGGKNISESNDI 876
            E+VHFT++SS   N ++D+D +          E T   ++  + +    G  N+S+S+  
Sbjct: 202  EDVHFTAMSS---NDESDTDVDGCNDDEGIVKEETLAQNSSIDMTVLNNGNCNVSDSDS- 257

Query: 875  ELSSNSEEDSDHLEMIIVKDVKAGDEVFNTYGSMGNAALLHRYGFTELDNPFDIVNIELN 696
              SS S+ D+  LEMI++KDV +G EVFNTYG +GNAALLHRYGFTE DN +DIVNI++ 
Sbjct: 258  --SSVSDGDTSMLEMIMIKDVSSGTEVFNTYGLLGNAALLHRYGFTEQDNSYDIVNIDME 315

Query: 695  MVXXXXXXXXXXXXXXXXXSMWRRIGYCGCVSQNSEYFEISSDGEPQYELLILLHIIFLT 516
            +V                 S+WR++GY  C SQNSEYFEIS DGEPQ ELL+LLHI+ L 
Sbjct: 316  LVLQWCTSVFSDRHSRARVSLWRKLGYSACGSQNSEYFEISFDGEPQIELLVLLHIMLLP 375

Query: 515  DEVYDKLNQTVPSTGNLDKDVGILLLHKNTKRIPLEIPDMAKNYLLTDNVCGALVSLADI 336
            D  Y KL+ +V   GN D+  G   L+ N    P +  +M+K  LL   VC  L SLAD+
Sbjct: 376  DNAYHKLDLSV--AGNCDESSGTTFLNGNI--FPSKAFNMSKKSLLPKKVCDVLSSLADM 431

Query: 335  RESFYRLNSLRDDIQSLSSC-CVRDRKLYHSMVLRVKERKILNNLRAYAS 189
            RES Y L S+ DDI++L  C  VR+RKLYHS++LR+ ERKIL  LR YAS
Sbjct: 432  RESLYGLKSIEDDIEALGRCSLVRERKLYHSLMLRINERKILQRLRNYAS 481


>ref|XP_002306017.1| SET domain-containing protein [Populus trichocarpa]
            gi|222848981|gb|EEE86528.1| SET domain-containing protein
            [Populus trichocarpa]
          Length = 468

 Score =  231 bits (589), Expect = 2e-58
 Identities = 135/287 (47%), Positives = 179/287 (62%)
 Frame = -3

Query: 1055 ENVHFTSVSSPLSNTDNDSDAEDNEYINNHHDESTEHLSTCKNGSPAALGGKNISESNDI 876
            E+VHFTS SS  S +D+DSD  D   ++  +                 +G K    S+++
Sbjct: 203  EDVHFTSTSSH-SESDDDSDNSDTVDLDADN-----------------IGNKE--PSSEL 242

Query: 875  ELSSNSEEDSDHLEMIIVKDVKAGDEVFNTYGSMGNAALLHRYGFTELDNPFDIVNIELN 696
            + SS + +D   LEMI+VKDVKAG EVFNTYG +GNAALLHRYGFTE DN F IVNI+L 
Sbjct: 243  DCSSVTGDDPLVLEMIMVKDVKAGVEVFNTYGLLGNAALLHRYGFTEPDNSFGIVNIDLE 302

Query: 695  MVXXXXXXXXXXXXXXXXXSMWRRIGYCGCVSQNSEYFEISSDGEPQYELLILLHIIFLT 516
            +V                 S+WRR+ Y GC SQ++EYFEISS+GEPQ ELLILL+II L 
Sbjct: 303  LVQEWSSSLFSSRFSRARVSLWRRLEYRGCDSQSAEYFEISSNGEPQIELLILLYIILLP 362

Query: 515  DEVYDKLNQTVPSTGNLDKDVGILLLHKNTKRIPLEIPDMAKNYLLTDNVCGALVSLADI 336
            ++ Y KL+  V +  N    +  +L  K       +I +M  + LLT++VC AL+ LAD 
Sbjct: 363  EDTYRKLDLAVSAANNHKGSIDTILFEKWNITWD-KISEMRADLLLTESVCNALLWLADK 421

Query: 335  RESFYRLNSLRDDIQSLSSCCVRDRKLYHSMVLRVKERKILNNLRAY 195
            RES Y  +S++DDI++L  CC ++RKLYHS+VLR  ER+IL  LR Y
Sbjct: 422  RESLYGSSSIKDDIEALEKCCTKERKLYHSLVLRASERRILEKLRTY 468


>ref|XP_003622367.1| SET domain-containing protein [Medicago truncatula]
            gi|355497382|gb|AES78585.1| SET domain-containing protein
            [Medicago truncatula]
          Length = 497

 Score =  231 bits (588), Expect = 3e-58
 Identities = 138/290 (47%), Positives = 181/290 (62%), Gaps = 1/290 (0%)
 Frame = -3

Query: 1055 ENVHFTSVSSPLSNTDNDSDAEDNEYINNHHDESTEHLSTCKNGSPAALGGKNISESNDI 876
            E+VHFT++SS   N +++ D +D         E  +  +  +N S   +        +D+
Sbjct: 202  EDVHFTALSS---NNESEDDTDD---------EIVDEEALAQNSS---MDKTEKGVDSDM 246

Query: 875  ELSSNSEEDSDHLEMIIVKDVKAGDEVFNTYGSMGNAALLHRYGFTELDNPFDIVNIELN 696
            E SS +E+D+  LEM+++KDV +G EVFNTYG +GNAALLHRYGFTE DN +DIVNI+L 
Sbjct: 247  EYSSITEDDTSMLEMVMIKDVSSGAEVFNTYGILGNAALLHRYGFTEQDNTYDIVNIDLE 306

Query: 695  MVXXXXXXXXXXXXXXXXXSMWRRIGYCGCVSQNSEYFEISSDGEPQYELLILLHIIFLT 516
            +V                 S+WRR+GY    ++NSEYFEIS DGEPQ ELLILL+IIFL 
Sbjct: 307  LVLQWCSSLFSNRRSRSRVSLWRRLGY-SSDTENSEYFEISFDGEPQMELLILLYIIFLP 365

Query: 515  DEVYDKLNQTVPSTGNLDKDVGILLLHKNTKRIPLEIPDMAKNYLLTDNVCGALVSLADI 336
            D+VY KL+ +V    N  +         N      ++ +M+K  L+T  VC AL+SLAD+
Sbjct: 366  DDVYHKLDLSVAVAENFHES-SEKTTFLNDNIFLKKLSNMSKKTLMTKEVCDALLSLADM 424

Query: 335  RESFYRLNSLRDDIQSLS-SCCVRDRKLYHSMVLRVKERKILNNLRAYAS 189
            RES Y L SL DDI++L  S  VRDRKLYHS VLR+ ERKIL  LR YAS
Sbjct: 425  RESLYGLKSLEDDIEALKRSSFVRDRKLYHSSVLRISERKILQKLRNYAS 474


>ref|XP_002876372.1| SET domain-containing protein [Arabidopsis lyrata subsp. lyrata]
            gi|297322210|gb|EFH52631.1| SET domain-containing protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 518

 Score =  231 bits (588), Expect = 3e-58
 Identities = 140/316 (44%), Positives = 187/316 (59%), Gaps = 21/316 (6%)
 Frame = -3

Query: 1055 ENVHFTSVSSPLSNTDNDSDAEDNEYINNH---HDESTEHLSTCKNGSPAALGGKNIS-- 891
            E+VHFT  S      D ++D  +N+   N     D+ +  +S+    S   + G+N    
Sbjct: 202  EDVHFTHES------DTEADESENDDAANEATDEDDPSSKISSSPEQSFEDVPGENTDDE 255

Query: 890  ----ESNDIELSSNSEEDSDHLEMIIVKDVKAGDEVFNTYGSMGNAALLHRYGFTELDNP 723
                E  D E SS  + D   L+MI+VKDV AG EVFNTYG MGNAALLHRYGFTE DN 
Sbjct: 256  AKEEEEEDDENSSMLQNDQSGLKMIMVKDVSAGTEVFNTYGLMGNAALLHRYGFTEFDNL 315

Query: 722  FDIVNIELNMVXXXXXXXXXXXXXXXXXSMWRRIGYCGCVSQNSEYFEISSDGEPQYELL 543
            +DIVNI+L +V                 ++WR++GY GC SQNSEYFE+SS GEPQ ELL
Sbjct: 316  YDIVNIDLELVTEWSTSSFTSRYTRARLALWRKLGYTGCESQNSEYFEVSSTGEPQTELL 375

Query: 542  ILLHIIFLTDEVYDKLNQTVPSTG-NLDKDVGILLLHKNTKRIPLEIP---------DMA 393
            ILL+I+ L D+ Y+KL+    +TG +L K+       + T     EI             
Sbjct: 376  ILLYILLLPDDTYNKLDLAESTTGASLSKE------GRETSSSSYEITIGKHKFVFGQSG 429

Query: 392  KNYLLTDNVCGALVSLADIRESFY-RLNSLRDDIQSLSSCCV-RDRKLYHSMVLRVKERK 219
             + LLTD VC AL+++ D RES Y  LNSL DDI  L +CC+ RDR++YHS+VLRV ERK
Sbjct: 430  NDILLTDGVCEALLTIVDKRESLYGSLNSLEDDIVRLKTCCLPRDRRVYHSLVLRVSERK 489

Query: 218  ILNNLRAYASSRSHKY 171
            IL  LR+Y  ++++++
Sbjct: 490  ILKKLRSYIHTKANEF 505


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