BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035528
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycin...   120   1e-25
ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypep...   119   3e-25
gb|AFK40333.1| unknown [Lotus japonicus]                              118   4e-25
gb|AFK37080.1| unknown [Medicago truncatula]                          117   1e-24
gb|ACJ85752.1| unknown [Medicago truncatula]                          117   1e-24

>ref|NP_001238607.1| uncharacterized protein LOC100527862 [Glycine max]
           gi|255633396|gb|ACU17055.1| unknown [Glycine max]
          Length = 180

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/87 (65%), Positives = 70/87 (80%)
 Frame = +2

Query: 2   DFASRKATSDHGYFVALTTLDKIGEGKVRKECGGVLFPVVFNCITFKPFKGEILQGVVNS 181
           DFA +KAT D GYF+A+TTL+KIGEGKVR+  G VLFPVVFN ITFK FKGEIL+GVV+ 
Sbjct: 36  DFAVKKATKDLGYFLAVTTLEKIGEGKVRQHTGDVLFPVVFNVITFKFFKGEILEGVVHK 95

Query: 182 VSKAGVFLTCGPVEQIFVPAKTMPDYQ 262
           V K GVF+ CGP+E +++    MPDY+
Sbjct: 96  VLKHGVFMRCGPIENVYLSNLKMPDYR 122


>ref|XP_002522607.1| DNA-directed RNA polymerase II 19 kD polypeptide rpb7, putative
           [Ricinus communis] gi|223538083|gb|EEF39694.1|
           DNA-directed RNA polymerase II 19 kD polypeptide rpb7,
           putative [Ricinus communis]
          Length = 176

 Score =  119 bits (298), Expect = 3e-25
 Identities = 56/86 (65%), Positives = 69/86 (80%)
 Frame = +2

Query: 2   DFASRKATSDHGYFVALTTLDKIGEGKVRKECGGVLFPVVFNCITFKPFKGEILQGVVNS 181
           DFAS+KAT D GY++A+TTL+ IGEGKVR+  G VLFPVVFN ITFK F+GEIL+GVV+ 
Sbjct: 36  DFASKKATKDLGYYLAVTTLESIGEGKVREHTGDVLFPVVFNGITFKIFRGEILEGVVHK 95

Query: 182 VSKAGVFLTCGPVEQIFVPAKTMPDY 259
           V K GVF+ CGP+E I++    MPDY
Sbjct: 96  VLKHGVFIRCGPIENIYLSCMKMPDY 121


>gb|AFK40333.1| unknown [Lotus japonicus]
          Length = 180

 Score =  118 bits (296), Expect = 4e-25
 Identities = 55/87 (63%), Positives = 69/87 (79%)
 Frame = +2

Query: 2   DFASRKATSDHGYFVALTTLDKIGEGKVRKECGGVLFPVVFNCITFKPFKGEILQGVVNS 181
           DFA+++AT D GYF A+TTLDK+GEGKVR+  G VLFPVVFN +TFK FKGEIL+GVV+ 
Sbjct: 36  DFAAKRATKDLGYFTAVTTLDKVGEGKVRQHTGDVLFPVVFNGVTFKLFKGEILEGVVHK 95

Query: 182 VSKAGVFLTCGPVEQIFVPAKTMPDYQ 262
           V K GVFL CGP+E +++    M DY+
Sbjct: 96  VLKHGVFLRCGPIEHVYLSNMKMADYR 122


>gb|AFK37080.1| unknown [Medicago truncatula]
          Length = 180

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/86 (62%), Positives = 68/86 (79%)
 Frame = +2

Query: 2   DFASRKATSDHGYFVALTTLDKIGEGKVRKECGGVLFPVVFNCITFKPFKGEILQGVVNS 181
           DFA++KAT D GYF+A+TTLDKIGEGKVR+  G VLFPVVFN +TFK FKGE+L+GVV+ 
Sbjct: 36  DFAAKKATKDMGYFLAVTTLDKIGEGKVRQHTGDVLFPVVFNAVTFKIFKGEVLEGVVHK 95

Query: 182 VSKAGVFLTCGPVEQIFVPAKTMPDY 259
           V K GVF+  GP+E  ++ +  MP Y
Sbjct: 96  VLKHGVFMRIGPIENAYLSSSKMPGY 121


>gb|ACJ85752.1| unknown [Medicago truncatula]
          Length = 180

 Score =  117 bits (292), Expect = 1e-24
 Identities = 54/86 (62%), Positives = 68/86 (79%)
 Frame = +2

Query: 2   DFASRKATSDHGYFVALTTLDKIGEGKVRKECGGVLFPVVFNCITFKPFKGEILQGVVNS 181
           DFA++KAT D GYF+A+TTLDKIGEGKVR+  G VLFPVVFN +TFK FKGE+L+GVV+ 
Sbjct: 36  DFAAKKATKDMGYFLAVTTLDKIGEGKVRQHTGDVLFPVVFNAVTFKIFKGEVLEGVVHK 95

Query: 182 VSKAGVFLTCGPVEQIFVPAKTMPDY 259
           V K GVF+  GP+E  ++ +  MP Y
Sbjct: 96  VLKHGVFMRIGPIENAYLSSSKMPGY 121