BLASTX nr result

ID: Coptis25_contig00035520 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035520
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003580135.1| PREDICTED: L-allo-threonine aldolase-like [B...   111   7e-23
ref|XP_002266992.1| PREDICTED: L-allo-threonine aldolase-like is...   111   7e-23
emb|CAN82414.1| hypothetical protein VITISV_039151 [Vitis vinifera]   111   7e-23
dbj|BAK03835.1| predicted protein [Hordeum vulgare subsp. vulgare]    110   2e-22
dbj|BAK01917.1| predicted protein [Hordeum vulgare subsp. vulgare]    110   2e-22

>ref|XP_003580135.1| PREDICTED: L-allo-threonine aldolase-like [Brachypodium distachyon]
          Length = 372

 Score =  111 bits (277), Expect = 7e-23
 Identities = 56/82 (68%), Positives = 62/82 (75%)
 Frame = +3

Query: 9   MVTRTVDLRSDTVTKPTXXXXXXXXXXXXXXXXLGSDPTANRFEAEMARIMGKEAALFVP 188
           MVT+ VDLRSDTVTKP+                LG+DPTA RFEAEMARIMGKEAALFVP
Sbjct: 1   MVTKVVDLRSDTVTKPSDAMRAAMAAADVDDDVLGADPTAQRFEAEMARIMGKEAALFVP 60

Query: 189 SGTMGNLISVLVHCEVRGSEVI 254
           SGTM NL+SVLVHC+ RGSE+I
Sbjct: 61  SGTMANLVSVLVHCDTRGSEII 82


>ref|XP_002266992.1| PREDICTED: L-allo-threonine aldolase-like isoform 1 [Vitis
           vinifera] gi|359488055|ref|XP_003633695.1| PREDICTED:
           L-allo-threonine aldolase-like isoform 2 [Vitis
           vinifera] gi|359488057|ref|XP_003633696.1| PREDICTED:
           L-allo-threonine aldolase-like isoform 3 [Vitis
           vinifera]
          Length = 364

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/82 (73%), Positives = 60/82 (73%)
 Frame = +3

Query: 9   MVTRTVDLRSDTVTKPTXXXXXXXXXXXXXXXXLGSDPTANRFEAEMARIMGKEAALFVP 188
           MVTRTVDLRSDTVTKPT                L  DPTA R E EMARI GKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTETMRAAMAIAEVDDDVLVCDPTAERLETEMARITGKEAALFVP 60

Query: 189 SGTMGNLISVLVHCEVRGSEVI 254
           SGTMGNLISVLVHCEVRGSEVI
Sbjct: 61  SGTMGNLISVLVHCEVRGSEVI 82


>emb|CAN82414.1| hypothetical protein VITISV_039151 [Vitis vinifera]
          Length = 397

 Score =  111 bits (277), Expect = 7e-23
 Identities = 60/82 (73%), Positives = 60/82 (73%)
 Frame = +3

Query: 9   MVTRTVDLRSDTVTKPTXXXXXXXXXXXXXXXXLGSDPTANRFEAEMARIMGKEAALFVP 188
           MVTRTVDLRSDTVTKPT                L  DPTA R E EMARI GKEAALFVP
Sbjct: 1   MVTRTVDLRSDTVTKPTETMRAAMAIAEVDDDVLVCDPTAERLETEMARITGKEAALFVP 60

Query: 189 SGTMGNLISVLVHCEVRGSEVI 254
           SGTMGNLISVLVHCEVRGSEVI
Sbjct: 61  SGTMGNLISVLVHCEVRGSEVI 82


>dbj|BAK03835.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 374

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = +3

Query: 9   MVTRTVDLRSDTVTKPTXXXXXXXXXXXXXXXXLGSDPTANRFEAEMARIMGKEAALFVP 188
           MVT+ VDLRSDTVTKP+                LG+DPTA RFEAEMARI GKEAALFVP
Sbjct: 1   MVTKVVDLRSDTVTKPSEAMRAAMAAAEVDDDVLGADPTAQRFEAEMARITGKEAALFVP 60

Query: 189 SGTMGNLISVLVHCEVRGSEVI 254
           SGTMGNL+SVL HC+ RGSEVI
Sbjct: 61  SGTMGNLVSVLTHCDTRGSEVI 82


>dbj|BAK01917.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 339

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/82 (68%), Positives = 61/82 (74%)
 Frame = +3

Query: 9   MVTRTVDLRSDTVTKPTXXXXXXXXXXXXXXXXLGSDPTANRFEAEMARIMGKEAALFVP 188
           MVT+ VDLRSDTVTKP+                LG+DPTA RFEAEMARI GKEAALFVP
Sbjct: 1   MVTKVVDLRSDTVTKPSEAMRAAMAAAEVDDDVLGADPTAQRFEAEMARITGKEAALFVP 60

Query: 189 SGTMGNLISVLVHCEVRGSEVI 254
           SGTMGNL+SVL HC+ RGSEVI
Sbjct: 61  SGTMGNLVSVLTHCDTRGSEVI 82


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