BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035502
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatul...    70   2e-10
emb|CBI32919.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|NP_197379.1| F-box domain-containing protein [Arabidopsis th...    65   8e-09
dbj|BAD94200.1| putative protein [Arabidopsis thaliana] gi|11074...    65   8e-09
ref|NP_567152.1| F-box, FBD and leucine rich repeat domain-conta...    63   2e-08

>ref|XP_003608305.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355509360|gb|AES90502.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 482

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +1

Query: 97  EGQNDGNGEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNL 252
           E Q++   EDR S+LP+ IILHILSFL+TKHVV T V S RWR+LW  +P L
Sbjct: 26  ENQSNEESEDRLSDLPDGIILHILSFLNTKHVVRTCVLSKRWRHLWKRIPTL 77


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 29/49 (59%), Positives = 34/49 (69%)
 Frame = +1

Query: 112 GNGEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGF 258
           G   DR SNLP+ ++ HI+SFL TK  V TSV S RWRYLW  +PNL F
Sbjct: 6   GKSRDRISNLPDAVLCHIISFLPTKFAVGTSVLSKRWRYLWASIPNLDF 54


>ref|NP_197379.1| F-box domain-containing protein [Arabidopsis thaliana]
           gi|334187755|ref|NP_001190332.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|357528794|sp|Q56YH2.2|FBD41_ARATH RecName:
           Full=FBD-associated F-box protein At5g18780
           gi|332005227|gb|AED92610.1| F-box domain-containing
           protein [Arabidopsis thaliana]
           gi|332005228|gb|AED92611.1| F-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 441

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +1

Query: 97  EGQNDGNGEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNL 252
           +G+  G+GEDR S LPE ++ HILSFL TK  V TSV SSRWR LW  VP L
Sbjct: 2   QGRVRGSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRL 53


>dbj|BAD94200.1| putative protein [Arabidopsis thaliana]
           gi|110741312|dbj|BAF02206.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 308

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 32/52 (61%), Positives = 37/52 (71%)
 Frame = +1

Query: 97  EGQNDGNGEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNL 252
           +G+  G+GEDR S LPE ++ HILSFL TK  V TSV SSRWR LW  VP L
Sbjct: 2   QGRVRGSGEDRISILPEPLLCHILSFLRTKDSVRTSVLSSRWRDLWLWVPRL 53


>ref|NP_567152.1| F-box, FBD and leucine rich repeat domain-containing protein
           [Arabidopsis thaliana]
           gi|334302807|sp|Q8LF09.2|FDL23_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At4g00160
           gi|332656430|gb|AEE81830.1| F-box, FBD and leucine rich
           repeat domain-containing protein [Arabidopsis thaliana]
          Length = 453

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = +1

Query: 118 GEDRFSNLPEHIILHILSFLHTKHVVLTSVFSSRWRYLWTLVPNLGF 258
           G+DR S LP+ +++ ILSFL TK VV TSVFS +WR LW LVPNL F
Sbjct: 14  GKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEF 60