BLASTX nr result

ID: Coptis25_contig00035500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035500
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane dom...   355   2e-96
emb|CAN75086.1| hypothetical protein VITISV_010815 [Vitis vinifera]   355   2e-96
ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis] g...   347   8e-94
ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane dom...   342   2e-92
ref|XP_002532394.1| synaptotagmin, putative [Ricinus communis] g...   342   2e-92

>ref|XP_002277970.2| PREDICTED: multiple C2 and transmembrane domain-containing protein
           2-like [Vitis vinifera]
          Length = 794

 Score =  355 bits (912), Expect = 2e-96
 Identities = 168/192 (87%), Positives = 182/192 (94%), Gaps = 1/192 (0%)
 Frame = -2

Query: 578 QRPTARQLWKQPIGVLEVGILSAHGLLPMKMKDGRGTTDAYCVAKYGQKWVRTRTIIDSP 399
           QRPTARQLWKQPIG+LEVGILSA GLLPMK +DGRGTTDAYCVAKYGQKWVRTRTI++S 
Sbjct: 366 QRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGQKWVRTRTILESS 425

Query: 398 SPKWNEQYTWEVYDPCTVITLGVFDNCHLGSSDKPGGSSSA-RDSKIGKVRIRLSTLESD 222
           +PKWNEQYTWEVYDPCTVITLGVFDNCHLG ++KPGG   A +DS+IGKVRIRLSTLE+D
Sbjct: 426 TPKWNEQYTWEVYDPCTVITLGVFDNCHLGGNEKPGGGGGAGKDSRIGKVRIRLSTLETD 485

Query: 221 RIYTNSYPLLVLHPSGVKKTGELQLAVRFTCLSLANTIYLYGHPLLPKMHYLHPFTVNQL 42
           RIYT++YPLLVLHPSGVKK GELQLAVRFTCLSLAN IYLYGHPLLPKMHYLHPFTVNQL
Sbjct: 486 RIYTHAYPLLVLHPSGVKKMGELQLAVRFTCLSLANMIYLYGHPLLPKMHYLHPFTVNQL 545

Query: 41  DSLRFQAMNIVA 6
           DSLR+QAM+IVA
Sbjct: 546 DSLRYQAMSIVA 557


>emb|CAN75086.1| hypothetical protein VITISV_010815 [Vitis vinifera]
          Length = 794

 Score =  355 bits (912), Expect = 2e-96
 Identities = 168/192 (87%), Positives = 182/192 (94%), Gaps = 1/192 (0%)
 Frame = -2

Query: 578 QRPTARQLWKQPIGVLEVGILSAHGLLPMKMKDGRGTTDAYCVAKYGQKWVRTRTIIDSP 399
           QRPTARQLWKQPIG+LEVGILSA GLLPMK +DGRGTTDAYCVAKYGQKWVRTRTI++S 
Sbjct: 366 QRPTARQLWKQPIGILEVGILSAQGLLPMKTRDGRGTTDAYCVAKYGQKWVRTRTILESS 425

Query: 398 SPKWNEQYTWEVYDPCTVITLGVFDNCHLGSSDKPGGSSSA-RDSKIGKVRIRLSTLESD 222
           +PKWNEQYTWEVYDPCTVITLGVFDNCHLG ++KPGG   A +DS+IGKVRIRLSTLE+D
Sbjct: 426 TPKWNEQYTWEVYDPCTVITLGVFDNCHLGGNEKPGGGGGAGKDSRIGKVRIRLSTLETD 485

Query: 221 RIYTNSYPLLVLHPSGVKKTGELQLAVRFTCLSLANTIYLYGHPLLPKMHYLHPFTVNQL 42
           RIYT++YPLLVLHPSGVKK GELQLAVRFTCLSLAN IYLYGHPLLPKMHYLHPFTVNQL
Sbjct: 486 RIYTHAYPLLVLHPSGVKKMGELQLAVRFTCLSLANMIYLYGHPLLPKMHYLHPFTVNQL 545

Query: 41  DSLRFQAMNIVA 6
           DSLR+QAM+IVA
Sbjct: 546 DSLRYQAMSIVA 557


>ref|XP_002513191.1| synaptotagmin, putative [Ricinus communis]
            gi|223547689|gb|EEF49182.1| synaptotagmin, putative
            [Ricinus communis]
          Length = 1049

 Score =  347 bits (890), Expect = 8e-94
 Identities = 162/192 (84%), Positives = 181/192 (94%)
 Frame = -2

Query: 578  QRPTARQLWKQPIGVLEVGILSAHGLLPMKMKDGRGTTDAYCVAKYGQKWVRTRTIIDSP 399
            QRPTA+QLWKQP+G+LEVGILSA GLLPMKMKDGRG+TDAYCVAKYGQKWVRTRTI+D+ 
Sbjct: 622  QRPTAKQLWKQPVGILEVGILSAQGLLPMKMKDGRGSTDAYCVAKYGQKWVRTRTILDTF 681

Query: 398  SPKWNEQYTWEVYDPCTVITLGVFDNCHLGSSDKPGGSSSARDSKIGKVRIRLSTLESDR 219
            SPKWNEQYTWEVYDPCTVITLGVFDNCHLG  +KP   ++ARDS+IGKVRIRLSTLE+ R
Sbjct: 682  SPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKPNAPNAARDSRIGKVRIRLSTLEAFR 741

Query: 218  IYTNSYPLLVLHPSGVKKTGELQLAVRFTCLSLANTIYLYGHPLLPKMHYLHPFTVNQLD 39
            IYT+SYPLLVLHP+GVKK GELQLAVRFT LSLAN IY+YGHPLLPKMHYLHPFTVNQ+D
Sbjct: 742  IYTHSYPLLVLHPTGVKKMGELQLAVRFTTLSLANMIYVYGHPLLPKMHYLHPFTVNQVD 801

Query: 38   SLRFQAMNIVAL 3
            +LR+QAM+IVA+
Sbjct: 802  NLRYQAMSIVAV 813


>ref|XP_003539651.1| PREDICTED: multiple C2 and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 1180

 Score =  342 bits (878), Expect = 2e-92
 Identities = 159/192 (82%), Positives = 179/192 (93%)
 Frame = -2

Query: 578  QRPTARQLWKQPIGVLEVGILSAHGLLPMKMKDGRGTTDAYCVAKYGQKWVRTRTIIDSP 399
            QRPT+RQLWKQPIG+LEVGIL A GLLPMKM+DGRG+TDAYCVAKYGQKWVRTRT++D+ 
Sbjct: 753  QRPTSRQLWKQPIGILEVGILGAQGLLPMKMRDGRGSTDAYCVAKYGQKWVRTRTLLDTF 812

Query: 398  SPKWNEQYTWEVYDPCTVITLGVFDNCHLGSSDKPGGSSSARDSKIGKVRIRLSTLESDR 219
            SPKWNEQYTWEVYDPCTVITLGVFDNCHLG  +K  G S+ARDS+IGKVRIRLSTLE++R
Sbjct: 813  SPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKAPGGSAARDSRIGKVRIRLSTLEANR 872

Query: 218  IYTNSYPLLVLHPSGVKKTGELQLAVRFTCLSLANTIYLYGHPLLPKMHYLHPFTVNQLD 39
            IYTNS+PLLVLHP GVKK GELQLAVRFT LSLAN +++YG PLLPKMHYLHPFTVNQ+D
Sbjct: 873  IYTNSHPLLVLHPHGVKKMGELQLAVRFTALSLANMVHIYGQPLLPKMHYLHPFTVNQID 932

Query: 38   SLRFQAMNIVAL 3
            +LR+QAMNIVA+
Sbjct: 933  NLRYQAMNIVAV 944


>ref|XP_002532394.1| synaptotagmin, putative [Ricinus communis]
           gi|223527890|gb|EEF29979.1| synaptotagmin, putative
           [Ricinus communis]
          Length = 793

 Score =  342 bits (878), Expect = 2e-92
 Identities = 163/193 (84%), Positives = 177/193 (91%), Gaps = 1/193 (0%)
 Frame = -2

Query: 578 QRPTARQLWKQPIGVLEVGILSAHGLLPMKMKDGRGTTDAYCVAKYGQKWVRTRTIIDSP 399
           QRPTARQLWK PIG+LEVGILSA GLLPMK K+GRGTTDAYCVAKYG KWVRTRTI++S 
Sbjct: 365 QRPTARQLWKNPIGILEVGILSAQGLLPMKPKEGRGTTDAYCVAKYGLKWVRTRTILESF 424

Query: 398 SPKWNEQYTWEVYDPCTVITLGVFDNCHLGSSDKPGGSSSAR-DSKIGKVRIRLSTLESD 222
           +PKWNEQYTWEVYDPCTVIT+GVFDNCHLG ++KP      R DS+IGKVRIRLSTLE+D
Sbjct: 425 NPKWNEQYTWEVYDPCTVITIGVFDNCHLGGTEKPASGGGGRGDSRIGKVRIRLSTLETD 484

Query: 221 RIYTNSYPLLVLHPSGVKKTGELQLAVRFTCLSLANTIYLYGHPLLPKMHYLHPFTVNQL 42
           RIYT+SYPLLVL PSG+KK GELQLAVRFTCLSLAN IYLYGHPLLPKMHYLHPFTVNQL
Sbjct: 485 RIYTHSYPLLVLQPSGLKKMGELQLAVRFTCLSLANMIYLYGHPLLPKMHYLHPFTVNQL 544

Query: 41  DSLRFQAMNIVAL 3
           DSLR+QAMNIVA+
Sbjct: 545 DSLRYQAMNIVAV 557


Top