BLASTX nr result

ID: Coptis25_contig00035496 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035496
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209...    90   2e-16
gb|ABK22087.1| unknown [Picea sitchensis]                              90   2e-16
ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|2...    88   8e-16
gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK...    88   8e-16
ref|XP_002531808.1| conserved hypothetical protein [Ricinus comm...    87   1e-15

>ref|XP_004142670.1| PREDICTED: uncharacterized protein LOC101209534 isoform 1 [Cucumis
           sativus] gi|449449837|ref|XP_004142671.1| PREDICTED:
           uncharacterized protein LOC101209534 isoform 2 [Cucumis
           sativus] gi|449510965|ref|XP_004163824.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 1 [Cucumis
           sativus] gi|449510969|ref|XP_004163825.1| PREDICTED:
           uncharacterized protein LOC101229310 isoform 2 [Cucumis
           sativus]
          Length = 370

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/68 (64%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 RKKMDPNIETPSKAPPTILNALTWSAQMDLSSNLKCQILNGIEIVLAKGV-SVVFKGWVV 29
           RKKMDP  ETP+KAPPT+LNA+TW+  M +SSNL+ Q LNG+E VLAKG+  + FK  VV
Sbjct: 249 RKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVV 308

Query: 28  ILRSLNNV 5
           +LR LNNV
Sbjct: 309 VLRCLNNV 316


>gb|ABK22087.1| unknown [Picea sitchensis]
          Length = 359

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/68 (67%), Positives = 53/68 (77%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 RKKMDPNIETPSKAPPTILNALTWSAQMDLSSNLKCQILNGIEIVLAKGVS-VVFKGWVV 29
           RKKMDPN ETP+K PPT+LNA TW+  M LSSN + Q LNGIE +LAKG+S  VFK  VV
Sbjct: 247 RKKMDPNFETPNKPPPTLLNASTWALHMGLSSNFRYQTLNGIEYLLAKGLSPFVFKTSVV 306

Query: 28  ILRSLNNV 5
           +LR LNNV
Sbjct: 307 VLRCLNNV 314


>ref|XP_002326276.1| predicted protein [Populus trichocarpa] gi|222833469|gb|EEE71946.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 RKKMDPNIETPSKAPPTILNALTWSAQMDLSSNLKCQILNGIEIVLAKGVS-VVFKGWVV 29
           RKKMDP  ETP+KAPPT+LNALTW+  M  SSNL+ Q LNG E +L KG+S + FK  VV
Sbjct: 176 RKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGAEFLLEKGLSPLAFKTSVV 235

Query: 28  ILRSLNNV 5
           +LR LNNV
Sbjct: 236 VLRCLNNV 243


>gb|ABK93697.1| unknown [Populus trichocarpa] gi|118486849|gb|ABK95259.1| unknown
           [Populus trichocarpa]
          Length = 357

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 44/68 (64%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 RKKMDPNIETPSKAPPTILNALTWSAQMDLSSNLKCQILNGIEIVLAKGVS-VVFKGWVV 29
           RKKMDP  ETP+KAPPT+LNALTW+  M  SSNL+ Q LNG E +L KG+S + FK  VV
Sbjct: 237 RKKMDPTFETPNKAPPTVLNALTWAIHMGFSSNLRYQTLNGAEFLLEKGLSPLAFKTSVV 296

Query: 28  ILRSLNNV 5
           +LR LNNV
Sbjct: 297 VLRCLNNV 304


>ref|XP_002531808.1| conserved hypothetical protein [Ricinus communis]
           gi|223528542|gb|EEF30565.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 680

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/68 (63%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
 Frame = -2

Query: 205 RKKMDPNIETPSKAPPTILNALTWSAQMDLSSNLKCQILNGIEIVLAKGV-SVVFKGWVV 29
           RKKMDP  ETP+K PPTILNA+TW+  M +SSNL+ Q LNG+E VL KG+  + FK  VV
Sbjct: 567 RKKMDPTFETPNKPPPTILNAVTWALHMGISSNLRYQTLNGVEFVLEKGLPPLAFKSSVV 626

Query: 28  ILRSLNNV 5
           +LR LNNV
Sbjct: 627 VLRCLNNV 634


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