BLASTX nr result
ID: Coptis25_contig00035493
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00035493
(353 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004161683.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic p... 125 5e-38
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ... 125 5e-38
ref|NP_001051012.1| Os03g0702800 [Oryza sativa Japonica Group] g... 124 1e-37
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ... 123 1e-37
ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [S... 122 3e-37
>ref|XP_004161683.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic peptide chain release
factor subunit 1-3-like [Cucumis sativus]
Length = 436
Score = 125 bits (313), Expect(2) = 5e-38
Identities = 55/77 (71%), Positives = 69/77 (89%)
Frame = -2
Query: 232 LEILIDWDNLDINRYLLKNNVTGETVIKHFNKEQEANQSNFHDSATSSDFEIQDKTSLLD 53
+EILI W+NLDINRY+LKN TGE +IKH NKEQEANQSNF DSATS++ E+Q+K +LL+
Sbjct: 318 VEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDSATSAELEVQEKMALLE 377
Query: 52 WFANDFRKFGCSLEFVT 2
WFAN+++KFGC+LEFVT
Sbjct: 378 WFANEYKKFGCTLEFVT 394
Score = 57.8 bits (138), Expect(2) = 5e-38
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 351 VKFVQEMPLIGKFFEETRQITGKYVSGIDNSLKALEMG 238
VKF+QE LIGK+FEE Q TGKYV G+D++LKALEMG
Sbjct: 279 VKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMG 316
>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
[Cucumis sativus]
Length = 436
Score = 125 bits (313), Expect(2) = 5e-38
Identities = 55/77 (71%), Positives = 69/77 (89%)
Frame = -2
Query: 232 LEILIDWDNLDINRYLLKNNVTGETVIKHFNKEQEANQSNFHDSATSSDFEIQDKTSLLD 53
+EILI W+NLDINRY+LKN TGE +IKH NKEQEANQSNF DSATS++ E+Q+K +LL+
Sbjct: 318 VEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRDSATSAELEVQEKMALLE 377
Query: 52 WFANDFRKFGCSLEFVT 2
WFAN+++KFGC+LEFVT
Sbjct: 378 WFANEYKKFGCTLEFVT 394
Score = 57.8 bits (138), Expect(2) = 5e-38
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 351 VKFVQEMPLIGKFFEETRQITGKYVSGIDNSLKALEMG 238
VKF+QE LIGK+FEE Q TGKYV G+D++LKALEMG
Sbjct: 279 VKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMG 316
>ref|NP_001051012.1| Os03g0702800 [Oryza sativa Japonica Group]
gi|41469461|gb|AAS07262.1| eukaryotic peptide chain
release factor subunit 1-3 (eRF1-3) [Oryza sativa
Japonica Group] gi|62733400|gb|AAX95517.1| Putative
peptide chain release factor subunit 1 protein [Oryza
sativa Japonica Group] gi|108710626|gb|ABF98421.1|
Eukaryotic peptide chain release factor subunit 1-2,
putative, expressed [Oryza sativa Japonica Group]
gi|113549483|dbj|BAF12926.1| Os03g0702800 [Oryza sativa
Japonica Group] gi|125545411|gb|EAY91550.1| hypothetical
protein OsI_13184 [Oryza sativa Indica Group]
gi|125587621|gb|EAZ28285.1| hypothetical protein
OsJ_12260 [Oryza sativa Japonica Group]
gi|215768469|dbj|BAH00698.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 437
Score = 124 bits (312), Expect(2) = 1e-37
Identities = 53/77 (68%), Positives = 70/77 (90%)
Frame = -2
Query: 232 LEILIDWDNLDINRYLLKNNVTGETVIKHFNKEQEANQSNFHDSATSSDFEIQDKTSLLD 53
+E LI W+NLD+NRY+LKN+ TGET IKH NKEQEA+QSNF D++T+++ E+QDKTSLL+
Sbjct: 318 VETLIVWENLDVNRYVLKNSATGETAIKHLNKEQEADQSNFRDTSTNAELEVQDKTSLLE 377
Query: 52 WFANDFRKFGCSLEFVT 2
WFAN+++KFGC+LEFVT
Sbjct: 378 WFANEYKKFGCTLEFVT 394
Score = 56.6 bits (135), Expect(2) = 1e-37
Identities = 26/38 (68%), Positives = 31/38 (81%)
Frame = -3
Query: 351 VKFVQEMPLIGKFFEETRQITGKYVSGIDNSLKALEMG 238
VKF+QE LIGK+FEE Q TGKYV G+D++LK LEMG
Sbjct: 279 VKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKTLEMG 316
>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
[Cucumis sativus] gi|449487371|ref|XP_004157593.1|
PREDICTED: eukaryotic peptide chain release factor
subunit 1-3-like [Cucumis sativus]
Length = 436
Score = 123 bits (309), Expect(2) = 1e-37
Identities = 55/77 (71%), Positives = 68/77 (88%)
Frame = -2
Query: 232 LEILIDWDNLDINRYLLKNNVTGETVIKHFNKEQEANQSNFHDSATSSDFEIQDKTSLLD 53
+EILI W+NLDINRY+LKN TGE +IKH NKEQEANQSNF D ATSS+ E+Q+K +LL+
Sbjct: 318 VEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRDPATSSELEVQEKMALLE 377
Query: 52 WFANDFRKFGCSLEFVT 2
WFAN+++KFGC+LEFVT
Sbjct: 378 WFANEYKKFGCTLEFVT 394
Score = 57.8 bits (138), Expect(2) = 1e-37
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 351 VKFVQEMPLIGKFFEETRQITGKYVSGIDNSLKALEMG 238
VKF+QE LIGK+FEE Q TGKYV G+D++LKALEMG
Sbjct: 279 VKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMG 316
>ref|XP_002466604.1| hypothetical protein SORBIDRAFT_01g010860 [Sorghum bicolor]
gi|241920458|gb|EER93602.1| hypothetical protein
SORBIDRAFT_01g010860 [Sorghum bicolor]
Length = 437
Score = 122 bits (305), Expect(2) = 3e-37
Identities = 52/77 (67%), Positives = 70/77 (90%)
Frame = -2
Query: 232 LEILIDWDNLDINRYLLKNNVTGETVIKHFNKEQEANQSNFHDSATSSDFEIQDKTSLLD 53
+E LI W+NLD+NRY+LKN+ TGETVIKH NKEQEA+QS+F D +T+++ E+Q+KTSLL+
Sbjct: 318 VETLIVWENLDVNRYVLKNSATGETVIKHLNKEQEADQSHFRDPSTNAELEVQEKTSLLE 377
Query: 52 WFANDFRKFGCSLEFVT 2
WFAN+++KFGC+LEFVT
Sbjct: 378 WFANEYKKFGCTLEFVT 394
Score = 58.2 bits (139), Expect(2) = 3e-37
Identities = 27/38 (71%), Positives = 32/38 (84%)
Frame = -3
Query: 351 VKFVQEMPLIGKFFEETRQITGKYVSGIDNSLKALEMG 238
VKF+QE LIGK+FEE Q TGKYV G+D++LKALEMG
Sbjct: 279 VKFIQEKKLIGKYFEEISQDTGKYVFGVDDTLKALEMG 316