BLASTX nr result

ID: Coptis25_contig00035489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035489
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533586.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CAN68753.1| hypothetical protein VITISV_035530 [Vitis vinifera]    66   3e-09
emb|CAN65561.1| hypothetical protein VITISV_034985 [Vitis vinifera]    65   8e-09
emb|CAN65560.1| hypothetical protein VITISV_034984 [Vitis vinifera]    65   8e-09

>ref|XP_002533586.1| conserved hypothetical protein [Ricinus communis]
           gi|223526530|gb|EEF28791.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 176

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/85 (44%), Positives = 52/85 (61%), Gaps = 12/85 (14%)
 Frame = -3

Query: 220 VLAGVEEVRLPSLGELKVDEE-------DDGLRTPTSLDHMIPVSKQRPPAPRKPKSLPT 62
           +L    +++LPSLGE K+ E+       DDG +TPTSL+H IP     PPAPRKPKSLP+
Sbjct: 67  LLISTLKIKLPSLGEFKIQEQEQEQQDLDDGCKTPTSLNHKIPTLLPCPPAPRKPKSLPS 126

Query: 61  KKRKASSN-----VCYSRMELIFPP 2
            KRK+ +         + +E +FPP
Sbjct: 127 NKRKSPARRRVLLDLSNEIESLFPP 151


>ref|XP_002313438.1| predicted protein [Populus trichocarpa] gi|222849846|gb|EEE87393.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 8/75 (10%)
 Frame = -3

Query: 202 EVRLPSLGELKV----DEEDDGLRTPTSLDHMIPVSKQRPPAPRKPKSLPTKKRKASSNV 35
           +++LPS+   ++    D++DDG +TPTSLD  IPV  Q PPAPRKPKSLP+ KRK+    
Sbjct: 66  KIKLPSVEAFQIEDDKDDDDDGFKTPTSLDRKIPVIFQCPPAPRKPKSLPSAKRKSPQRR 125

Query: 34  CY----SRMELIFPP 2
                 + +E +FPP
Sbjct: 126 VLLDLSNEIESLFPP 140


>emb|CAN68753.1| hypothetical protein VITISV_035530 [Vitis vinifera]
          Length = 212

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/55 (54%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = -3

Query: 202 EVRLPSLGELKVDEEDD--GLRTPTSLDHMIPVSKQRPPAPRKPKSLPTKKRKAS 44
           ++++ SL E KV+E+DD  G +TPTS+DH IP+    PPAP+KPKSLP+ KR+A+
Sbjct: 124 DLKMSSLAEFKVEEDDDNDGFKTPTSVDHKIPLILPCPPAPKKPKSLPSTKRRAA 178


>emb|CAN65561.1| hypothetical protein VITISV_034985 [Vitis vinifera]
          Length = 321

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
 Frame = -3

Query: 205 EEVRLPSLGELK-VDEEDDGLRTPTSLDHMIPVSKQRPPAPRKP---KSLPTKKR--KAS 44
           +E   PSLGEL  VDEE++G RTPTS++H IP   + PPAPRKP   +++P K+R  K  
Sbjct: 229 QEPGRPSLGELSAVDEENEGFRTPTSMEHKIPAITECPPAPRKPTATRAIPMKRRISKVP 288

Query: 43  SNVCYSRMELIFPP 2
             + +   E++ PP
Sbjct: 289 RRLQFEEFEVLIPP 302


>emb|CAN65560.1| hypothetical protein VITISV_034984 [Vitis vinifera]
          Length = 210

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
 Frame = -3

Query: 205 EEVRLPSLGELK-VDEEDDGLRTPTSLDHMIPVSKQRPPAPRKP---KSLPTKKR--KAS 44
           +E   PSLGEL  VDEE++G RTPTS++H IP   + PPAPRKP   +++P K+R  K  
Sbjct: 97  QEPGRPSLGELSAVDEENEGFRTPTSMEHKIPAITECPPAPRKPTATRAIPMKRRISKVP 156

Query: 43  SNVCYSRMELIFPP 2
             + +   E++ PP
Sbjct: 157 RRLQFEEFEVLIPP 170


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