BLASTX nr result

ID: Coptis25_contig00035480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035480
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]    94   1e-17
emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera]    93   2e-17
emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]    92   6e-17
emb|CAN76553.1| hypothetical protein VITISV_024710 [Vitis vinifera]    89   5e-16
emb|CAN75034.1| hypothetical protein VITISV_022186 [Vitis vinifera]    87   1e-15

>emb|CAN60732.1| hypothetical protein VITISV_010209 [Vitis vinifera]
          Length = 1409

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/79 (62%), Positives = 54/79 (68%)
 Frame = +3

Query: 189 SILEDLTIRITQVLXXXXXXXXXXXXXXXXAKIGIKLDDTNYALWSQVVEMYISGEDKLG 368
           SIL DLT R+TQVL                 +IGIKLD TNYALWSQ+VEMYISG+DKLG
Sbjct: 16  SILADLTTRMTQVLNHNQTQNHITSHEPA-TQIGIKLDGTNYALWSQIVEMYISGKDKLG 74

Query: 369 YINGDFPQPQQTYSNFNRW 425
           YINGDFPQP QT   F +W
Sbjct: 75  YINGDFPQPLQTDPAFRKW 93


>emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera]
          Length = 1077

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 46/80 (57%), Positives = 54/80 (67%)
 Frame = +3

Query: 186 ESILEDLTIRITQVLXXXXXXXXXXXXXXXXAKIGIKLDDTNYALWSQVVEMYISGEDKL 365
           +SIL DLT R+T+VL                  IGIKL+ +NYALWSQVVEMYISG+DKL
Sbjct: 16  DSILSDLTTRMTEVLTRAQTSPQPLLADSSTTPIGIKLEGSNYALWSQVVEMYISGKDKL 75

Query: 366 GYINGDFPQPQQTYSNFNRW 425
           GYINGD PQP +T  +F RW
Sbjct: 76  GYINGDSPQPPETDPSFRRW 95


>emb|CAN65966.1| hypothetical protein VITISV_005935 [Vitis vinifera]
          Length = 1154

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 49/79 (62%), Positives = 54/79 (68%)
 Frame = +3

Query: 189 SILEDLTIRITQVLXXXXXXXXXXXXXXXXAKIGIKLDDTNYALWSQVVEMYISGEDKLG 368
           SIL DLT R+TQVL                 +IGIKLD TNYALWSQ+VEMYISG+DKLG
Sbjct: 16  SILADLTTRMTQVLNHNQTQNXITSHEPT-TQIGIKLDGTNYALWSQIVEMYISGKDKLG 74

Query: 369 YINGDFPQPQQTYSNFNRW 425
           YINGD PQP QT   F +W
Sbjct: 75  YINGDLPQPLQTDPAFKKW 93


>emb|CAN76553.1| hypothetical protein VITISV_024710 [Vitis vinifera]
          Length = 459

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/109 (45%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = +3

Query: 102 TKNTQTR-SKTMVEPTDVVDYQQHGRNSTESILEDLTIRITQVLXXXXXXXXXXXXXXXX 278
           TK   T  S++M + T+++   Q    +TESIL++LT ++T+VL                
Sbjct: 210 TKEGDTNYSESMEDSTELI---QPPNTTTESILDNLTTKMTKVLSRAQASSPLPFTDSPT 266

Query: 279 AKIGIKLDDTNYALWSQVVEMYISGEDKLGYINGDFPQPQQTYSNFNRW 425
             + IKLD +NYALWSQVVEMYI G+DKLGYINGD PQP +T  +F +W
Sbjct: 267 V-LSIKLDGSNYALWSQVVEMYILGKDKLGYINGDLPQPLETGPSFRKW 314


>emb|CAN75034.1| hypothetical protein VITISV_022186 [Vitis vinifera]
          Length = 303

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 49/82 (59%), Positives = 55/82 (67%)
 Frame = +3

Query: 132 MVEPTDVVDYQQHGRNSTESILEDLTIRITQVLXXXXXXXXXXXXXXXXAKIGIKLDDTN 311
           MV P D V   Q G +ST+SILEDL  R+T+VL                A+IGIKLD TN
Sbjct: 1   MVNPNDGV---QTGGSSTDSILEDLXARMTEVLTKNQTQTHLSTYDTSAAQIGIKLDGTN 57

Query: 312 YALWSQVVEMYISGEDKLGYIN 377
           YALWSQVVEMYISG+DKLGYIN
Sbjct: 58  YALWSQVVEMYISGKDKLGYIN 79


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