BLASTX nr result

ID: Coptis25_contig00035479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035479
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265921.2| PREDICTED: uncharacterized protein LOC100249...    64   1e-08
emb|CBI39325.3| unnamed protein product [Vitis vinifera]               64   1e-08
ref|XP_003634606.1| PREDICTED: LOW QUALITY PROTEIN: probable pep...    64   2e-08
emb|CBI39335.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN71099.1| hypothetical protein VITISV_000973 [Vitis vinifera]    64   2e-08

>ref|XP_002265921.2| PREDICTED: uncharacterized protein LOC100249450 [Vitis vinifera]
          Length = 1115

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEE 120
           GTKTYRYS   D ++PFVRI QVFV AARNWRTT SS   EE
Sbjct: 245 GTKTYRYSVNGDEKSPFVRIGQVFVAAARNWRTTDSSLNFEE 286



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEEAKP 111
           GT+TYRYS + + R+PFVRI +VFV AA+NW+TTP   A E   P
Sbjct: 794 GTRTYRYSIKKNERSPFVRIGRVFVAAAKNWKTTPPVEATENLPP 838


>emb|CBI39325.3| unnamed protein product [Vitis vinifera]
          Length = 2163

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/42 (71%), Positives = 32/42 (76%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEE 120
           GTKTYRYS   D ++PFVRI QVFV AARNWRTT SS   EE
Sbjct: 783 GTKTYRYSVNGDEKSPFVRIGQVFVAAARNWRTTDSSLNFEE 824



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/45 (57%), Positives = 33/45 (73%)
 Frame = -3

Query: 245  GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEEAKP 111
            GT+TYRYS + + R+PFVRI +VFV AA+NW+TTP   A E   P
Sbjct: 1330 GTRTYRYSIKKNERSPFVRIGRVFVAAAKNWKTTPPVEATENLPP 1374



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/42 (64%), Positives = 29/42 (69%)
 Frame = -3

Query: 245  GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEE 120
            GTKTYRYS   +  NPFVRI +VFV A RNWRT PS    EE
Sbjct: 1836 GTKTYRYSINTNEENPFVRIGKVFVEATRNWRTMPSLKTAEE 1877



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 242 TKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEE 120
           TKTYRYS + + ++PFVRI+QVFV A +NW TT SS   EE
Sbjct: 246 TKTYRYSVKGNEKSPFVRISQVFVAAIKNWHTTDSSLTDEE 286


>ref|XP_003634606.1| PREDICTED: LOW QUALITY PROTEIN: probable peptide/nitrate
           transporter At1g22540-like [Vitis vinifera]
          Length = 572

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEEAKPSPP 102
           GT+TYRYS + D R+PFVRI +VF+ AA+NWRT PS  A EE     P
Sbjct: 245 GTRTYRYSVKKDERSPFVRIGKVFIAAAKNWRTMPSLVATEELAREAP 292


>emb|CBI39335.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEEAKPSPP 102
           GT+TYRYS + D R+PFVRI +VF+ AA+NWRT PS  A EE     P
Sbjct: 388 GTRTYRYSVKKDERSPFVRIGKVFIAAAKNWRTMPSLVATEELAREAP 435


>emb|CAN71099.1| hypothetical protein VITISV_000973 [Vitis vinifera]
          Length = 572

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = -3

Query: 245 GTKTYRYSFRDDNRNPFVRIAQVFVTAARNWRTTPSSTALEEAKPSPP 102
           GT+TYRYS + D R+PFVRI +VF+ AA+NWRT PS  A EE     P
Sbjct: 245 GTRTYRYSVKKDERSPFVRIGKVFIAAAKNWRTMPSLVATEELAREAP 292


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