BLASTX nr result

ID: Coptis25_contig00035452 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035452
         (822 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus c...    86   1e-14
emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]    80   4e-13
ref|XP_002870042.1| hypothetical protein ARALYDRAFT_493010 [Arab...    61   3e-07
ref|ZP_05603213.1| predicted protein [Staphylococcus aureus subs...    60   8e-07
ref|ZP_14668059.1| hypothetical protein JC2156_00370 [Weissella ...    59   2e-06

>ref|XP_002522536.1| hypothetical protein RCOM_1013810 [Ricinus communis]
           gi|223538227|gb|EEF39836.1| hypothetical protein
           RCOM_1013810 [Ricinus communis]
          Length = 807

 Score = 85.5 bits (210), Expect = 1e-14
 Identities = 79/299 (26%), Positives = 126/299 (42%), Gaps = 41/299 (13%)
 Frame = +3

Query: 39  ERSTEESINGKQGEKKSRFSFSFDFNELDSFDFGSDLMKGEKKSDKASDNKGFNS----- 203
           E S  +S +G    K+  F+FSF+FN+LD+F+FG  L +GEK   K  D+KG +S     
Sbjct: 97  ESSKGDSSSGNHRGKRDCFNFSFEFNDLDNFNFGPTLTEGEKTPAKNLDSKGPDSDRIEH 156

Query: 204 ------PGKEDSV-----------------QALRSKPVASIDAP------------EDSD 278
                 P K D                   Q L+  P    D              +D  
Sbjct: 157 QGAEVDPAKVDEEIHQGSKANRAGVDDGKNQGLKVNPAGGADGGKYQRIKVNPADFDDGQ 216

Query: 279 THKLPTSQNASSSESEQLIGGVGK-FNSTNGSPSTSANFGNVSPSHSTEASLEKEIIVSE 455
           T KL  S N ++S  E  + G G   +S++  PS   N  ++  +H +++  EK I  S 
Sbjct: 217 TDKLLASDNTTTSVVETTVNGEGTGISSSDKFPSRYRNIEDLVVTHGSKSLPEKTISASS 276

Query: 456 KETNQCSQQSQKTVSTESNAEDTIQESSIELISKAGFDQEANPELEGEVCSSATAENTNP 635
           +E +Q SQ  +KT+ T   A+       ++ +    F Q+A   ++  V   AT EN+  
Sbjct: 277 EEADQQSQSLEKTMPTVPYAQKARHILPVQAVDGNDFTQDAESSIQAGVL--ATKENSE- 333

Query: 636 VEALNISVKLCNLESSPTARMSGPKSTKNDCDKMLVDQSGVEDTPGDQSMQGSKDIKHS 812
                     CNLE + + R+    S   +     +  S    T G +S++G  +  +S
Sbjct: 334 ----------CNLEHNVSDRVIVGGSNHENSQ---LKNSAASWTSGSESIRGEIEKSYS 379


>emb|CAN81126.1| hypothetical protein VITISV_013166 [Vitis vinifera]
          Length = 649

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 49/135 (36%), Positives = 75/135 (55%), Gaps = 1/135 (0%)
 Frame = +3

Query: 39  ERSTEESINGKQGEKKSRFSFSFDFNELDSFDFGSDLMKGEKKSDKASDNKGFNSPGKED 218
           E S E+S+N     K+  F+FSFDFN+LD+F+F   L K EKKS K            + 
Sbjct: 99  EXSGEDSVNRNHQGKQDNFAFSFDFNDLDTFNFEPSLTKAEKKSSKGVS-------ADKS 151

Query: 219 SVQALRSKPVASIDAPEDSDTHKLPTSQNASSSESEQLIGGVGKFNSTNGSPST-SANFG 395
           + Q  R+     I A +D    KLP  + A++ +++ L+GG+G  +S N + S+ +ANF 
Sbjct: 152 ACQDSRNPLAEDIIAFDDGIAMKLPACEMATTLKADTLVGGLGGLDSINDNGSSETANFE 211

Query: 396 NVSPSHSTEASLEKE 440
           N S S+    S+EK+
Sbjct: 212 NQSLSNEARTSMEKK 226


>ref|XP_002870042.1| hypothetical protein ARALYDRAFT_493010 [Arabidopsis lyrata subsp.
           lyrata] gi|297315878|gb|EFH46301.1| hypothetical protein
           ARALYDRAFT_493010 [Arabidopsis lyrata subsp. lyrata]
          Length = 712

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 61/237 (25%), Positives = 100/237 (42%), Gaps = 5/237 (2%)
 Frame = +3

Query: 39  ERSTEESINGKQGEKKSRFSFSFDFNELDSFDFGSD-LMKGEKKSDKASDNKGFNSPGKE 215
           + S+++  +G   +KK+ F+FS+DF+ LD FD GS    KG K + K  D K  ++  K 
Sbjct: 90  KESSDDKPSGNSKQKKNPFAFSYDFDALDDFDLGSSPPKKGSKTTTKTMDCKEISASRK- 148

Query: 216 DSVQALRSKPVASIDAPEDSDTH-KLPTSQNASSSESEQLIGGVGKFNSTNGSPSTSANF 392
                        +D  +D D    LP ++ A S  +  +            S +T    
Sbjct: 149 -------------VDKSDDLDFGLDLPITRQAPSKANTDVQAKASAEKENQNSKTTDTIV 195

Query: 393 GNVSPSHSTEASLEKEIIVSEKETNQCSQQSQKTVSTESNAEDTIQESSIE---LISKAG 563
            N S +HS++A+LE    + + E  +  Q S+K  S        +Q  S++   L +   
Sbjct: 196 VNKS-THSSQAALES---MGDFEAVESPQGSRKKTSQTHTL--CVQPQSVDTSPLKTSCS 249

Query: 564 FDQEANPELEGEVCSSATAENTNPVEALNISVKLCNLESSPTARMSGPKSTKNDCDK 734
             +E +     E C S      +P+ A  I+    N E+SP         TK DC +
Sbjct: 250 MVEEMD-----EPCPSNETVAPSPLHASEIAHTAVNRETSPDIHELCRSGTKEDCPR 301


>ref|ZP_05603213.1| predicted protein [Staphylococcus aureus subsp. aureus 65-1322]
            gi|257429446|ref|ZP_05605833.1| serine-rich
            repeat-containing protein [Staphylococcus aureus subsp.
            aureus 68-397] gi|257432094|ref|ZP_05608457.1|
            serine-rich repeat-containing protein [Staphylococcus
            aureus subsp. aureus E1410]
            gi|257435054|ref|ZP_05611105.1| cell wall surface anchor
            family protein [Staphylococcus aureus subsp. aureus M876]
            gi|282922476|ref|ZP_06330166.1| hypothetical protein
            SARG_00128 [Staphylococcus aureus subsp. aureus C101]
            gi|293511490|ref|ZP_06670184.1| conserved hypothetical
            protein [Staphylococcus aureus subsp. aureus M809]
            gi|257276442|gb|EEV07893.1| predicted protein
            [Staphylococcus aureus subsp. aureus 65-1322]
            gi|257279927|gb|EEV10514.1| serine-rich repeat-containing
            protein [Staphylococcus aureus subsp. aureus 68-397]
            gi|257282973|gb|EEV13105.1| serine-rich repeat-containing
            protein [Staphylococcus aureus subsp. aureus E1410]
            gi|257285650|gb|EEV15766.1| cell wall surface anchor
            family protein [Staphylococcus aureus subsp. aureus M876]
            gi|282314697|gb|EFB45083.1| hypothetical protein
            SARG_00128 [Staphylococcus aureus subsp. aureus C101]
            gi|291465448|gb|EFF07980.1| conserved hypothetical
            protein [Staphylococcus aureus subsp. aureus M809]
          Length = 1731

 Score = 59.7 bits (143), Expect = 8e-07
 Identities = 65/281 (23%), Positives = 110/281 (39%), Gaps = 24/281 (8%)
 Frame = +3

Query: 45   STEESINGKQGEKKSRF-SFSFDFNELDSFDFGSDLMKGEKKSDKAS---------DNKG 194
            ST ES +G     +S+  S S   +   S    + +   E  SD  S         +  G
Sbjct: 1340 STSESESGSTSSSESKSDSTSMSLSMSQSISGSTSVSTSESLSDSTSTSLSLSASMNQSG 1399

Query: 195  FNSPGKEDSVQALRSKPVASIDAPEDSDTHKLPTSQNASSSESEQLIGGVGKFNST--NG 368
             +S     S     S   +  D+   S      TSQ+ S+S S  L        ST  +G
Sbjct: 1400 VDSNSASQSASTSTSTSTSESDSQSTSSYTSQSTSQSESTSTSTSLSDSTSMSRSTSQSG 1459

Query: 369  SPSTSANFG-----------NVSPSHSTEASLEKEIIVSEKETNQCSQQSQKTVSTESNA 515
            S STSA+             + S S ST  S    +  S   +N  S+ + K +ST ++A
Sbjct: 1460 STSTSASLSASESESDSQSISTSASDSTSESTSTSLSDSTSTSNSTSESTSKAISTSASA 1519

Query: 516  EDTIQESSIELISKAGFDQEANPELEGEVCSSATAENTNPVEALNIS-VKLCNLESSPTA 692
             ++   S+    S +   Q +  + +    S +T+E+T+  ++ +IS  +  +  +S + 
Sbjct: 1520 SESDSSSTSLSDSTSASMQSSESDSQSTSASGSTSESTSESDSTSISDSESVSTSTSMSL 1579

Query: 693  RMSGPKSTKNDCDKMLVDQSGVEDTPGDQSMQGSKDIKHST 815
              S   ST       +     + D+    SM  S  + +ST
Sbjct: 1580 STSDSTSTSESLSTSMSGSQSISDST-STSMSNSTSMSNST 1619


>ref|ZP_14668059.1| hypothetical protein JC2156_00370 [Weissella koreensis KCTC 3621]
            gi|394745271|gb|EJF34155.1| hypothetical protein
            JC2156_00370 [Weissella koreensis KCTC 3621]
          Length = 875

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 65/261 (24%), Positives = 103/261 (39%), Gaps = 4/261 (1%)
 Frame = +3

Query: 45   STEESINGKQGEKKSRFSFSFDFNELDSFDFGSDLMKGEKKSDKASDNKGFNSPGKEDSV 224
            ST +S++    E  S      D N L   D GS+    E  SD  SDN    S    DSV
Sbjct: 596  STSDSLSDNASESDSTSDSVSDSNSLSDSDNGSE---SESTSDSLSDNAS-ESESTSDSV 651

Query: 225  QALRSKPVASIDAPEDSDTHKLPTSQ----NASSSESEQLIGGVGKFNSTNGSPSTSANF 392
                S   ++ D+  D+ +    TS     N S SES      V   NS + S S S + 
Sbjct: 652  SDSNSLSDSTSDSVSDNASDSESTSDSLSDNVSDSESTS--DSVSDSNSLSDSTSDSVS- 708

Query: 393  GNVSPSHSTEASLEKEIIVSEKETNQCSQQSQKTVSTESNAEDTIQESSIELISKAGFDQ 572
             N S S ST  S+      SE  ++  S  +  + ST  +  D+        +S +  D 
Sbjct: 709  DNASDSESTSDSVSDNASESESTSDSVSDNASDSESTSDSVSDS------NSLSDSTSDS 762

Query: 573  EANPELEGEVCSSATAENTNPVEALNISVKLCNLESSPTARMSGPKSTKNDCDKMLVDQS 752
             ++   E    S + ++N +  E+ + S+     ES  T+      ++++D     +  +
Sbjct: 763  LSDNASESGSTSDSVSDNASESESTSDSLSDNASESESTSDSVSDNASESDSTSDSLSDN 822

Query: 753  GVEDTPGDQSMQGSKDIKHST 815
              E      S+  S  +  ST
Sbjct: 823  ASESDSTSDSVSDSNSLSDST 843


Top