BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035450
         (638 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   105   7e-21
ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   101   1e-19
ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydro...    98   1e-18
emb|CBI21539.3| unnamed protein product [Vitis vinifera]               98   1e-18
emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]    98   1e-18

>ref|XP_003524288.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 549

 Score =  105 bits (262), Expect = 7e-21
 Identities = 75/191 (39%), Positives = 104/191 (54%), Gaps = 5/191 (2%)
 Frame = -3

Query: 570 QILCIQLQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVXXXXXXXXXXXGKIQVK-- 397
           +ILCIQL+R  +N FGE VKLQGHISFP+ILD+  F    +             + +K  
Sbjct: 324 RILCIQLKRVYMNVFGELVKLQGHISFPLILDVLSFMTTRLGVKTQDIDVQSLPLNLKYN 383

Query: 396 -QHLLPIPRHNYSDMQLEWQMLKHTD--GPTEDYVISDYGGSLHRTLHDKRAQAFQAQSG 226
            ++  P    N+SD+Q E   LK +   G T + + SD G      +     QA  + + 
Sbjct: 384 RRNFFP----NHSDLQSEISTLKFSGLYGATREQINSD-GVIDDGFVSSTNGQALHSDT- 437

Query: 225 VFQSEGLSHPEITKPPMRSDIKMDTREIHPLVPSKNSMYQLVSVVEHFGRAGTGHYTVYR 46
           VF   G S    +   M+S  ++D      LVP +  +YQLVSVVEHFG+AG+GHYTVYR
Sbjct: 438 VFPCSGSSESIHSDTHMQSIDQVDVS--CNLVPQETCLYQLVSVVEHFGKAGSGHYTVYR 495

Query: 45  RVKEESNGEDS 13
            V+ ES+ + S
Sbjct: 496 SVRVESSEDVS 506


>ref|XP_003532855.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Glycine
           max]
          Length = 563

 Score =  101 bits (251), Expect = 1e-19
 Identities = 75/199 (37%), Positives = 101/199 (50%), Gaps = 12/199 (6%)
 Frame = -3

Query: 591 ISMTIYLQILCIQLQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVXXXXXXXXXXXG 412
           +SM    +ILCIQL+R  +N FGE VKLQGHISFP+ILD+  F    +            
Sbjct: 331 LSMARCPRILCIQLKRVYMNVFGELVKLQGHISFPLILDVLSFMTTRLGVKKHDIDVQSV 390

Query: 411 KIQVKQHLLPIPRHNYSDMQLEWQMLKHT------------DGPTEDYVISDYGGSLHRT 268
            + +K +   I   N+SD+Q E   LK +            DG  +D ++S   G   + 
Sbjct: 391 PLNLKYNKR-IFFPNHSDLQSEISTLKFSGLHGAKKEQIKSDGVIDDGLVSSTNG---QA 446

Query: 267 LHDKRAQAFQAQSGVFQSEGLSHPEITKPPMRSDIKMDTREIHPLVPSKNSMYQLVSVVE 88
           LH+           VF   G S    +   M+S  ++D      LVP +   YQLVSVVE
Sbjct: 447 LHNDT---------VFPCSGSSESIHSDTHMQSIDQVDVS--CNLVPQETCSYQLVSVVE 495

Query: 87  HFGRAGTGHYTVYRRVKEE 31
           HFG+AG+GHYTVYR V+ E
Sbjct: 496 HFGKAGSGHYTVYRSVRVE 514


>ref|XP_002275476.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 27-like [Vitis
           vinifera]
          Length = 641

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
 Frame = -3

Query: 570 QILCIQLQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVXXXXXXXXXXXGKIQVKQH 391
           +ILCI LQRAS+  FGE  K+QGHISFP+IL+L PF K  V            + + +Q+
Sbjct: 361 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEVGIKNWEDNFLRQRAK-QQN 419

Query: 390 LLPIPRHNYSDMQLEWQMLKHTDGPTEDYVISD--YGGSLHRTL--------HDKRAQAF 241
             P+P   +  +Q + +ML    G   + + S+  Y   L  T              ++ 
Sbjct: 420 QQPVPDLKHFKLQFDTRMLNCIYGLEGENMNSEARYADELGSTTLKLMGSMNFPTLGESS 479

Query: 240 QAQSGVFQSEGLSHPEITKPPMRSDIKMDTREIHPLVPSKNSMYQLVSVVEHFGRAGTGH 61
            A++G F    L H        R    +DT             Y LVSVVEHFGR G+GH
Sbjct: 480 LAETGGFSDTKLEHRRDEVSMARDCDSLDTHS-----------YHLVSVVEHFGRDGSGH 528

Query: 60  YTVYRRVKEESNGE 19
           YTVYRRV+ E   E
Sbjct: 529 YTVYRRVRTEQEKE 542


>emb|CBI21539.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
 Frame = -3

Query: 570 QILCIQLQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVXXXXXXXXXXXGKIQVKQH 391
           +ILCI LQRAS+  FGE  K+QGHISFP+IL+L PF K  V            + + +Q+
Sbjct: 306 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEVGIKNWEDNFLRQRAK-QQN 364

Query: 390 LLPIPRHNYSDMQLEWQMLKHTDGPTEDYVISD--YGGSLHRTL--------HDKRAQAF 241
             P+P   +  +Q + +ML    G   + + S+  Y   L  T              ++ 
Sbjct: 365 QQPVPDLKHFKLQFDTRMLNCIYGLEGENMNSEARYADELGSTTLKLMGSMNFPTLGESS 424

Query: 240 QAQSGVFQSEGLSHPEITKPPMRSDIKMDTREIHPLVPSKNSMYQLVSVVEHFGRAGTGH 61
            A++G F    L H        R    +DT             Y LVSVVEHFGR G+GH
Sbjct: 425 LAETGGFSDTKLEHRRDEVSMARDCDSLDTHS-----------YHLVSVVEHFGRDGSGH 473

Query: 60  YTVYRRVKEESNGE 19
           YTVYRRV+ E   E
Sbjct: 474 YTVYRRVRTEQEKE 487


>emb|CAN60856.1| hypothetical protein VITISV_026074 [Vitis vinifera]
          Length = 559

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 69/194 (35%), Positives = 93/194 (47%), Gaps = 10/194 (5%)
 Frame = -3

Query: 570 QILCIQLQRASVNKFGESVKLQGHISFPMILDLFPFTKDAVXXXXXXXXXXXGKIQVKQH 391
           +ILCI LQRAS+  FGE  K+QGHISFP+IL+L PF K  V            + + +Q+
Sbjct: 306 KILCIHLQRASMTIFGELTKVQGHISFPLILNLLPFMKSEVGIKNWEDNFLRXRAK-QQN 364

Query: 390 LLPIPRHNYSDMQLEWQMLKHTDGPTEDYVISD--YGGSLHRTL--------HDKRAQAF 241
             P+P   +  +Q + +ML    G   + + S+  Y   L  T              ++ 
Sbjct: 365 QQPVPDLKHFXLQFDTRMLNCIYGLEGENMNSEARYADELGSTTLKLMGXMNFPTLGESS 424

Query: 240 QAQSGVFQSEGLSHPEITKPPMRSDIKMDTREIHPLVPSKNSMYQLVSVVEHFGRAGTGH 61
            A++G F    L H        R    +DT             Y LVSVVEHFGR G+GH
Sbjct: 425 LAETGGFSDTKLEHRRDEVSMARDCDSLDTHS-----------YHLVSVVEHFGRDGSGH 473

Query: 60  YTVYRRVKEESNGE 19
           YTVYRRV+ E   E
Sbjct: 474 YTVYRRVRTEQEKE 487