BLASTX nr result

ID: Coptis25_contig00035448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035448
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]               88   8e-16
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]    88   8e-16
ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852...    86   3e-15
emb|CBI33170.3| unnamed protein product [Vitis vinifera]               86   3e-15
emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]    86   3e-15

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +3

Query: 210  DPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAVNGQLPFSRPNGA 344
            D HHTLSFFMHDILGGSNPSA AVTGIVTNPAVNGQ+PF++PNGA
Sbjct: 905  DLHHTLSFFMHDILGGSNPSAGAVTGIVTNPAVNGQVPFAKPNGA 949


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/45 (88%), Positives = 43/45 (95%)
 Frame = +3

Query: 210 DPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAVNGQLPFSRPNGA 344
           D HHTLSFFMHDILGGSNPSA AVTGIVTNPAVNGQ+PF++PNGA
Sbjct: 838 DLHHTLSFFMHDILGGSNPSAGAVTGIVTNPAVNGQVPFAKPNGA 882


>ref|XP_003635227.1| PREDICTED: uncharacterized protein LOC100852526 [Vitis vinifera]
          Length = 358

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/117 (45%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
 Frame = +3

Query: 18  VVPGVTP-VSKPMTGIAPVATPAVAQPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194
           V P  TP V++P  G+A  ATPAVAQP                                 
Sbjct: 57  VAPIATPAVAQPNPGVAAAATPAVAQPNPGAAAQPNPGAAAQPNPGAAVQPNPGVAAQPN 116

Query: 195 XXXXX-------DPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAVNGQLPFSRPNGA 344
                          H LSFFMHDILGGSNPSA+AVTGIVTNPAVNGQ+PF++PNGA
Sbjct: 117 PGAVAATSGGMAHDDHPLSFFMHDILGGSNPSARAVTGIVTNPAVNGQVPFAKPNGA 173


>emb|CBI33170.3| unnamed protein product [Vitis vinifera]
          Length = 997

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/117 (45%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
 Frame = +3

Query: 18   VVPGVTP-VSKPMTGIAPVATPAVAQPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194
            V P  TP V++P  G+A  ATPAVAQP                                 
Sbjct: 736  VAPIATPAVAQPNPGVAAAATPAVAQPNPGAAAQPNPGAAAQPNPGAAVQPNPGVAAQPN 795

Query: 195  XXXXX-------DPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAVNGQLPFSRPNGA 344
                           H LSFFMHDILGGSNPSA+AVTGIVTNPAVNGQ+PF++PNGA
Sbjct: 796  PGAVAATSGGMAHDDHPLSFFMHDILGGSNPSARAVTGIVTNPAVNGQVPFAKPNGA 852


>emb|CAN77499.1| hypothetical protein VITISV_002404 [Vitis vinifera]
          Length = 1393

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 53/117 (45%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
 Frame = +3

Query: 18   VVPGVTP-VSKPMTGIAPVATPAVAQPIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 194
            V P  TP V++P  G+A  ATPAVAQP                                 
Sbjct: 1092 VAPIATPAVAQPNPGVAAAATPAVAQPNPGAAAQPNPGAAAQPNPGAAVQPNPGVAAQPN 1151

Query: 195  XXXXX-------DPHHTLSFFMHDILGGSNPSAKAVTGIVTNPAVNGQLPFSRPNGA 344
                           H LSFFMHDILGGSNPSA+AVTGIVTNPAVNGQ+PF++PNGA
Sbjct: 1152 PGAVAATSGGMAHDDHPLSFFMHDILGGSNPSARAVTGIVTNPAVNGQVPFAKPNGA 1208


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