BLASTX nr result

ID: Coptis25_contig00035446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035446
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279676.2| PREDICTED: uncharacterized protein LOC100250...   146   3e-33
emb|CBI27917.3| unnamed protein product [Vitis vinifera]              146   3e-33
ref|XP_002514104.1| conserved hypothetical protein [Ricinus comm...   137   1e-30
gb|ABK96358.1| unknown [Populus trichocarpa x Populus deltoides]      137   1e-30
ref|XP_004157921.1| PREDICTED: uncharacterized protein LOC101223...   127   1e-27

>ref|XP_002279676.2| PREDICTED: uncharacterized protein LOC100250764 [Vitis vinifera]
          Length = 597

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/105 (69%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 307 MPGTIQVSVLELVGLPSSS---ISVKISMGKREYQMWDNEEFSFPLTTVRDNLIVTLCDI 137
           MPGTIQVSVL+  GLPSSS   IS+K+SMGKREYQ WD  +FSFPLTT+R NL VTL D 
Sbjct: 1   MPGTIQVSVLDFTGLPSSSPSSISIKVSMGKREYQTWDKGDFSFPLTTLRQNLTVTLQDA 60

Query: 136 EGNELSQTGVSTKLVMEKGSWDDIFPLEGGGRLHMKLQFILSEEE 2
           EGNE+S   + T LV++KG  DD FPL+GGG +HMKLQFILSEEE
Sbjct: 61  EGNEISHAEIDTMLVVQKGLLDDTFPLKGGGHVHMKLQFILSEEE 105


>emb|CBI27917.3| unnamed protein product [Vitis vinifera]
          Length = 657

 Score =  146 bits (368), Expect = 3e-33
 Identities = 73/105 (69%), Positives = 84/105 (80%), Gaps = 3/105 (2%)
 Frame = -2

Query: 307 MPGTIQVSVLELVGLPSSS---ISVKISMGKREYQMWDNEEFSFPLTTVRDNLIVTLCDI 137
           MPGTIQVSVL+  GLPSSS   IS+K+SMGKREYQ WD  +FSFPLTT+R NL VTL D 
Sbjct: 61  MPGTIQVSVLDFTGLPSSSPSSISIKVSMGKREYQTWDKGDFSFPLTTLRQNLTVTLQDA 120

Query: 136 EGNELSQTGVSTKLVMEKGSWDDIFPLEGGGRLHMKLQFILSEEE 2
           EGNE+S   + T LV++KG  DD FPL+GGG +HMKLQFILSEEE
Sbjct: 121 EGNEISHAEIDTMLVVQKGLLDDTFPLKGGGHVHMKLQFILSEEE 165


>ref|XP_002514104.1| conserved hypothetical protein [Ricinus communis]
           gi|223546560|gb|EEF48058.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 556

 Score =  137 bits (345), Expect = 1e-30
 Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 4/106 (3%)
 Frame = -2

Query: 307 MPGTIQVSVLELVGLPSS----SISVKISMGKREYQMWDNEEFSFPLTTVRDNLIVTLCD 140
           MPG IQVSVLE + LPSS     +S+K+SMGKR YQ  D  EFSFPLTT+RD LIVTL D
Sbjct: 1   MPGIIQVSVLEFMALPSSPPLSQMSIKVSMGKRYYQTRDKGEFSFPLTTLRDKLIVTLQD 60

Query: 139 IEGNELSQTGVSTKLVMEKGSWDDIFPLEGGGRLHMKLQFILSEEE 2
            +G E+S T + T+LV+EKG WDDIF LEGGG +H+KLQF+LSEE+
Sbjct: 61  AQGKEVSYTVIETRLVIEKGIWDDIFQLEGGGHVHLKLQFVLSEED 106


>gb|ABK96358.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 162

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/106 (63%), Positives = 85/106 (80%), Gaps = 4/106 (3%)
 Frame = -2

Query: 307 MPGTIQVSVLELVGLPSSS----ISVKISMGKREYQMWDNEEFSFPLTTVRDNLIVTLCD 140
           MPG I+VSVL+ +GL SSS    +S+K+SMGKREY+  D  +F FPLTT+R+NLIVTL D
Sbjct: 1   MPGAIEVSVLDFMGLQSSSPPSQMSIKVSMGKREYETRDKGDFIFPLTTLRENLIVTLQD 60

Query: 139 IEGNELSQTGVSTKLVMEKGSWDDIFPLEGGGRLHMKLQFILSEEE 2
            +GNE+S TGV T+LV+EKG WDD FPLEGGG + MK+QF+LSE +
Sbjct: 61  AKGNEISHTGVETRLVIEKGIWDDTFPLEGGGHVRMKVQFVLSEAD 106


>ref|XP_004157921.1| PREDICTED: uncharacterized protein LOC101223934 [Cucumis sativus]
          Length = 161

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/105 (56%), Positives = 81/105 (77%), Gaps = 3/105 (2%)
 Frame = -2

Query: 307 MPGTIQVSVLELVGLPS---SSISVKISMGKREYQMWDNEEFSFPLTTVRDNLIVTLCDI 137
           MPGTI++SVLE + LP    S IS+K+SMGKR Y+  D  +FSFPLTT+RD++I+ + D 
Sbjct: 1   MPGTIRLSVLEFIDLPELLPSQISIKVSMGKRHYETSDKGDFSFPLTTLRDDVILIVQDA 60

Query: 136 EGNELSQTGVSTKLVMEKGSWDDIFPLEGGGRLHMKLQFILSEEE 2
            GNE+S+ GV  K ++EKG WDD+FPLEGGG +H++ QF LSE++
Sbjct: 61  GGNEISRAGVQAKSIVEKGYWDDLFPLEGGGHVHLQFQFALSEDD 105


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