BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035441
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidops...    61   1e-07
ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group] g...    61   1e-07
ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group] g...    61   1e-07
gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]               61   1e-07
ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containin...    61   1e-07

>ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
           gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc
           finger CCCH domain-containing protein 4; Short=AtC3H4
           gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30
           [Arabidopsis thaliana] gi|332189993|gb|AEE28114.1|
           pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis
           thaliana]
          Length = 481

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 56  DKECKICSKPFDVAGWEAKREVR--KTVICYPCCKLQNVCQLC 178
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C
Sbjct: 41  DKECKICTRPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVC 83


>ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
           gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 49; Short=OsC3H49
           gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa
           Japonica Group] gi|222636833|gb|EEE66965.1| hypothetical
           protein OsJ_23846 [Oryza sativa Japonica Group]
          Length = 486

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 56  DKECKICSKPFDVAGWEAKREVR--KTVICYPCCKLQNVCQLC 178
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVC 83


>ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
           gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 40; Short=OsC3H40
           gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding
           protein-like [Oryza sativa Japonica Group]
           gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa
           Japonica Group] gi|125596196|gb|EAZ35976.1| hypothetical
           protein OsJ_20278 [Oryza sativa Japonica Group]
           gi|215767752|dbj|BAG99980.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 482

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 56  DKECKICSKPFDVAGWEAKREVR--KTVICYPCCKLQNVCQLC 178
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVC 83


>gb|AFW85648.1| pre-mRNA-splicing factor SLT11 [Zea mays]
          Length = 493

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 56  DKECKICSKPFDVAGWEAKREVR--KTVICYPCCKLQNVCQLC 178
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVC 83


>ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
           [Brachypodium distachyon]
          Length = 488

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 26/43 (60%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
 Frame = +2

Query: 56  DKECKICSKPFDVAGWEAKREVR--KTVICYPCCKLQNVCQLC 178
           DKECKIC++PF V  W   R+ R  KT IC  CCKL+NVCQ+C
Sbjct: 41  DKECKICARPFTVFRWRPGRDARYKKTEICQTCCKLKNVCQVC 83