BLASTX nr result
ID: Coptis25_contig00035428
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035428 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi... 152 2e-35 dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare] 146 2e-33 ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2... 145 3e-33 ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containi... 144 1e-32 gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indi... 139 3e-31 >ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial [Vitis vinifera] Length = 531 Score = 152 bits (385), Expect = 2e-35 Identities = 75/123 (60%), Positives = 86/123 (69%) Frame = +2 Query: 2 AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181 AYRVFQ M S GCEPS +TYEI+VRMFC+EE VDMAL+VW++MKAKG+LP MHMFS+LI Sbjct: 408 AYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLI 467 Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361 N L +NKLDEAC YF EMLD GIRPP +F N KLDKIR T Sbjct: 468 NSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTT 527 Query: 362 RQI 370 + I Sbjct: 528 QVI 530 Score = 65.1 bits (157), Expect = 6e-09 Identities = 30/88 (34%), Positives = 52/88 (59%) Frame = +2 Query: 11 VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190 V++EM+ G EP A TY I++ C D A++++++M+A +P+ H++ +LINGL Sbjct: 271 VYREMKDE-GFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGL 329 Query: 191 SRDNKLDEACAYFQEMLDSGIRPPGPLF 274 + +L EA +F+ SG P P + Sbjct: 330 GSERRLTEALQFFERSKASGFTPEAPTY 357 >dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 565 Score = 146 bits (368), Expect = 2e-33 Identities = 72/120 (60%), Positives = 84/120 (70%) Frame = +2 Query: 2 AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181 AY VFQ M + GCEP NTY ++V MFCS E VD+AL+VWNQMK KG+LP MHMFS+LI Sbjct: 443 AYNVFQGMSKD-GCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALI 501 Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361 NGL +N+L+EACAYFQEMLD GIRPPG LF N LKLD++RKT Sbjct: 502 NGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKT 561 Score = 62.4 bits (150), Expect = 4e-08 Identities = 30/80 (37%), Positives = 47/80 (58%) Frame = +2 Query: 11 VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190 V+QEM + G +P Y +++ FC D A++V+ +M+ G +PS H++ LINGL Sbjct: 306 VYQEM-LDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGL 364 Query: 191 SRDNKLDEACAYFQEMLDSG 250 + +LDEA YF+ SG Sbjct: 365 GSEERLDEALKYFELSKASG 384 >ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa] Length = 424 Score = 145 bits (367), Expect = 3e-33 Identities = 73/119 (61%), Positives = 85/119 (71%) Frame = +2 Query: 2 AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181 AY VFQ+M GC+PS +TYEIIVRMFC+E+ VDMA++VW+QMKAKGILP MHMFS+LI Sbjct: 302 AYSVFQKMSCE-GCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLI 360 Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRK 358 N L ++KLDEAC YFQEMLD GIRPP LF N F KLDK+RK Sbjct: 361 NSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRK 419 Score = 64.3 bits (155), Expect = 1e-08 Identities = 31/88 (35%), Positives = 50/88 (56%) Frame = +2 Query: 11 VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190 V+ EM+ G EP TY I++ C D A++++++M+AK PS H++ +LINGL Sbjct: 165 VYNEMKDE-GFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGL 223 Query: 191 SRDNKLDEACAYFQEMLDSGIRPPGPLF 274 + +L EA +F+ SG P P + Sbjct: 224 GAEKRLSEALEFFELSKASGFVPEAPTY 251 >ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060, mitochondrial-like [Brachypodium distachyon] Length = 547 Score = 144 bits (362), Expect = 1e-32 Identities = 72/120 (60%), Positives = 80/120 (66%) Frame = +2 Query: 2 AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181 AY VFQ M GCEP NTY ++V MFCS E VDMAL+VW QMK KG+LP MHMFSSLI Sbjct: 425 AYNVFQRMGME-GCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLI 483 Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361 NGL +N+L+EAC YFQEMLD GIRPPG LF N LKLD +RKT Sbjct: 484 NGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKT 543 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/80 (38%), Positives = 47/80 (58%) Frame = +2 Query: 11 VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190 V+QEM + G +P Y ++ FC D A++V+ +M+A G +PS H++ LINGL Sbjct: 288 VYQEM-LDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGL 346 Query: 191 SRDNKLDEACAYFQEMLDSG 250 + +LDEA YF+ SG Sbjct: 347 GSEERLDEALKYFELSKASG 366 >gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group] Length = 540 Score = 139 bits (349), Expect = 3e-31 Identities = 68/120 (56%), Positives = 81/120 (67%) Frame = +2 Query: 2 AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181 AY +FQ ME + GCEP NTY ++V MFCS E VDMAL+VW QMK KG+LP MHMFS+LI Sbjct: 418 AYNLFQRMERD-GCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476 Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361 NGL DN+L+EAC YFQEMLD GIRPPG LF N +L+ +R+T Sbjct: 477 NGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRRT 536 Score = 62.8 bits (151), Expect = 3e-08 Identities = 31/80 (38%), Positives = 48/80 (60%) Frame = +2 Query: 11 VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190 V+QEM + G +P Y +++ FC D A++V+++M+ G +PS H++ LINGL Sbjct: 281 VYQEM-LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339 Query: 191 SRDNKLDEACAYFQEMLDSG 250 +LDEA YFQ +SG Sbjct: 340 GSMERLDEALKYFQLSKESG 359