BLASTX nr result

ID: Coptis25_contig00035428 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035428
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containi...   152   2e-35
dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]    146   2e-33
ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|2...   145   3e-33
ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indi...   139   3e-31

>ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial [Vitis vinifera]
          Length = 531

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/123 (60%), Positives = 86/123 (69%)
 Frame = +2

Query: 2   AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181
           AYRVFQ M S  GCEPS +TYEI+VRMFC+EE VDMAL+VW++MKAKG+LP MHMFS+LI
Sbjct: 408 AYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLI 467

Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361
           N L  +NKLDEAC YF EMLD GIRPP  +F N                   KLDKIR T
Sbjct: 468 NSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDKIRTT 527

Query: 362 RQI 370
           + I
Sbjct: 528 QVI 530



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/88 (34%), Positives = 52/88 (59%)
 Frame = +2

Query: 11  VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190
           V++EM+   G EP A TY I++   C     D A++++++M+A   +P+ H++ +LINGL
Sbjct: 271 VYREMKDE-GFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGL 329

Query: 191 SRDNKLDEACAYFQEMLDSGIRPPGPLF 274
             + +L EA  +F+    SG  P  P +
Sbjct: 330 GSERRLTEALQFFERSKASGFTPEAPTY 357


>dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 565

 Score =  146 bits (368), Expect = 2e-33
 Identities = 72/120 (60%), Positives = 84/120 (70%)
 Frame = +2

Query: 2   AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181
           AY VFQ M  + GCEP  NTY ++V MFCS E VD+AL+VWNQMK KG+LP MHMFS+LI
Sbjct: 443 AYNVFQGMSKD-GCEPQLNTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALI 501

Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361
           NGL  +N+L+EACAYFQEMLD GIRPPG LF N                  LKLD++RKT
Sbjct: 502 NGLCFENRLEEACAYFQEMLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKT 561



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/80 (37%), Positives = 47/80 (58%)
 Frame = +2

Query: 11  VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190
           V+QEM  + G +P    Y +++  FC     D A++V+ +M+  G +PS H++  LINGL
Sbjct: 306 VYQEM-LDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFREMETNGCMPSPHVYCMLINGL 364

Query: 191 SRDNKLDEACAYFQEMLDSG 250
             + +LDEA  YF+    SG
Sbjct: 365 GSEERLDEALKYFELSKASG 384


>ref|XP_002315895.1| predicted protein [Populus trichocarpa] gi|222864935|gb|EEF02066.1|
           predicted protein [Populus trichocarpa]
          Length = 424

 Score =  145 bits (367), Expect = 3e-33
 Identities = 73/119 (61%), Positives = 85/119 (71%)
 Frame = +2

Query: 2   AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181
           AY VFQ+M    GC+PS +TYEIIVRMFC+E+ VDMA++VW+QMKAKGILP MHMFS+LI
Sbjct: 302 AYSVFQKMSCE-GCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLI 360

Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRK 358
           N L  ++KLDEAC YFQEMLD GIRPP  LF N                F  KLDK+RK
Sbjct: 361 NSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNLLDEGKKDTVVVFERKLDKLRK 419



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/88 (35%), Positives = 50/88 (56%)
 Frame = +2

Query: 11  VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190
           V+ EM+   G EP   TY I++   C     D A++++++M+AK   PS H++ +LINGL
Sbjct: 165 VYNEMKDE-GFEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGL 223

Query: 191 SRDNKLDEACAYFQEMLDSGIRPPGPLF 274
             + +L EA  +F+    SG  P  P +
Sbjct: 224 GAEKRLSEALEFFELSKASGFVPEAPTY 251


>ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
           mitochondrial-like [Brachypodium distachyon]
          Length = 547

 Score =  144 bits (362), Expect = 1e-32
 Identities = 72/120 (60%), Positives = 80/120 (66%)
 Frame = +2

Query: 2   AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181
           AY VFQ M    GCEP  NTY ++V MFCS E VDMAL+VW QMK KG+LP MHMFSSLI
Sbjct: 425 AYNVFQRMGME-GCEPQLNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLI 483

Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361
           NGL  +N+L+EAC YFQEMLD GIRPPG LF N                  LKLD +RKT
Sbjct: 484 NGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALIEGGRISLAQDMALKLDTLRKT 543



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/80 (38%), Positives = 47/80 (58%)
 Frame = +2

Query: 11  VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190
           V+QEM  + G +P    Y  ++  FC     D A++V+ +M+A G +PS H++  LINGL
Sbjct: 288 VYQEM-LDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCMPSPHVYCMLINGL 346

Query: 191 SRDNKLDEACAYFQEMLDSG 250
             + +LDEA  YF+    SG
Sbjct: 347 GSEERLDEALKYFELSKASG 366


>gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
          Length = 540

 Score =  139 bits (349), Expect = 3e-31
 Identities = 68/120 (56%), Positives = 81/120 (67%)
 Frame = +2

Query: 2   AYRVFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLI 181
           AY +FQ ME + GCEP  NTY ++V MFCS E VDMAL+VW QMK KG+LP MHMFS+LI
Sbjct: 418 AYNLFQRMERD-GCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALI 476

Query: 182 NGLSRDNKLDEACAYFQEMLDSGIRPPGPLFGNXXXXXXXXXXXXXXXSFGLKLDKIRKT 361
           NGL  DN+L+EAC YFQEMLD GIRPPG LF N                   +L+ +R+T
Sbjct: 477 NGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLAQEVTQRLEMLRRT 536



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 31/80 (38%), Positives = 48/80 (60%)
 Frame = +2

Query: 11  VFQEMESNFGCEPSANTYEIIVRMFCSEESVDMALQVWNQMKAKGILPSMHMFSSLINGL 190
           V+QEM  + G +P    Y +++  FC     D A++V+++M+  G +PS H++  LINGL
Sbjct: 281 VYQEM-LDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCMPSPHVYCMLINGL 339

Query: 191 SRDNKLDEACAYFQEMLDSG 250
               +LDEA  YFQ   +SG
Sbjct: 340 GSMERLDEALKYFQLSKESG 359


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