BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035424
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    60   1e-07
ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07
emb|CBI30094.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containi...    60   2e-07
ref|XP_002529164.1| pentatricopeptide repeat-containing protein,...    56   3e-06

>ref|XP_004166467.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g35030, mitochondrial-like [Cucumis sativus]
          Length = 649

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 37/44 (84%)
 Frame = -3

Query: 136 KDHSAGHNISRSNYLITTLTRTGKITEARRLFDEMPEKDVVTWT 5
           +D SA  N++RSN+LIT L + GKI EAR++F+EMP++DVV+WT
Sbjct: 58  RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWT 101


>ref|XP_004136647.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Cucumis sativus]
          Length = 649

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 26/44 (59%), Positives = 37/44 (84%)
 Frame = -3

Query: 136 KDHSAGHNISRSNYLITTLTRTGKITEARRLFDEMPEKDVVTWT 5
           +D SA  N++RSN+LIT L + GKI EAR++F+EMP++DVV+WT
Sbjct: 58  RDFSANSNVARSNWLITQLGKEGKIGEARQVFEEMPDRDVVSWT 101


>emb|CBI30094.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -3

Query: 136 KDHSAGHNISRSNYLITTLTRTGKITEARRLFDEMPEKDVVTWTT 2
           KD +   N++R N++IT L++ G+I EARRLFDEM E DV+TWTT
Sbjct: 59  KDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTT 103


>ref|XP_003632690.1| PREDICTED: pentatricopeptide repeat-containing protein At2g35030,
           mitochondrial-like [Vitis vinifera]
          Length = 635

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 26/45 (57%), Positives = 35/45 (77%)
 Frame = -3

Query: 136 KDHSAGHNISRSNYLITTLTRTGKITEARRLFDEMPEKDVVTWTT 2
           KD +   N++R N++IT L++ G+I EARRLFDEM E DV+TWTT
Sbjct: 44  KDFTVDGNVARCNWMITNLSKDGRIMEARRLFDEMREPDVITWTT 88


>ref|XP_002529164.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223531388|gb|EEF33223.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 453

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -3

Query: 130 HSAGHNISRSNYLITTLTRTGKITEARRLFDEMPEKDVVTWTT 2
           HSA   ++R N+ IT L R GKI EAR++FD M E+DV+TWTT
Sbjct: 49  HSASSEVARFNWHITKLCREGKINEARQVFDRMLERDVITWTT 91