BLASTX nr result
ID: Coptis25_contig00035421
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00035421 (241 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arab... 104 3e-25 gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03] 104 5e-25 gb|ABC94632.1| ubiquitin C [Ictalurus punctatus] 101 5e-25 gb|ABI53722.1| polyubiquitin [Pyropia yezoensis] 103 6e-25 gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712] 102 6e-25 >ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp. lyrata] gi|297318920|gb|EFH49342.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp. lyrata] Length = 306 Score = 104 bits (260), Expect(2) = 3e-25 Identities = 54/60 (90%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTLTDY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 37 PPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96 Score = 35.4 bits (80), Expect(2) = 3e-25 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 98 TIDNVKAKIQDKEGIPPDQQ 117 Score = 102 bits (255), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 113 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172 Score = 102 bits (255), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 189 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248 Score = 35.4 bits (80), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 174 TIDNVKAKIQDKEGIPPDQQ 193 Score = 35.4 bits (80), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 250 TIDNVKAKIQDKEGIPPDQQ 269 Score = 68.2 bits (165), Expect = 7e-10 Identities = 34/40 (85%), Positives = 34/40 (85%), Gaps = 1/40 (2%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GG Sbjct: 265 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304 Score = 39.3 bits (90), Expect(2) = 6e-06 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = +3 Query: 120 MQIFAKTLTGKTITLEVESS 179 MQIF KTLTGKTITLEVESS Sbjct: 1 MQIFVKTLTGKTITLEVESS 20 Score = 35.4 bits (80), Expect(2) = 6e-06 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 22 TIDNVKAKIQDKEGIPPDQQ 41 >gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03] Length = 305 Score = 104 bits (260), Expect(2) = 5e-25 Identities = 54/60 (90%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTLTDY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 37 PPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96 Score = 34.7 bits (78), Expect(2) = 5e-25 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 98 TIDNVKSKIQDKEGIPPDQQ 117 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 174 TIDNVKSKIQDKEGIPPDQQ 193 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 250 TIDNVKSKIQDKEGIPPDQQ 269 Score = 68.6 bits (166), Expect = 5e-10 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 1/40 (2%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GG Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304 >gb|ABC94632.1| ubiquitin C [Ictalurus punctatus] Length = 192 Score = 101 bits (251), Expect(2) = 5e-25 Identities = 52/60 (86%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVE S Sbjct: 76 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 135 Score = 38.1 bits (87), Expect(2) = 5e-25 Identities = 17/20 (85%), Positives = 18/20 (90%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TIG VK KIQD+EGIPPDQQ Sbjct: 137 TIGNVKAKIQDKEGIPPDQQ 156 Score = 98.6 bits (244), Expect(2) = 3e-23 Identities = 51/59 (86%), Positives = 52/59 (88%), Gaps = 1/59 (1%) Frame = +3 Query: 6 PDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVE S Sbjct: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 59 Score = 35.0 bits (79), Expect(2) = 3e-23 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 61 TIENVKAKIQDKEGIPPDQQ 80 Score = 68.6 bits (166), Expect = 5e-10 Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 1/40 (2%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GG Sbjct: 152 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 191 >gb|ABI53722.1| polyubiquitin [Pyropia yezoensis] Length = 533 Score = 103 bits (256), Expect(2) = 6e-25 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248 Score = 35.8 bits (81), Expect(2) = 6e-25 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK+KIQD+EGIPPDQQ Sbjct: 250 TIDNVKLKIQDKEGIPPDQQ 269 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 37 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 324 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 341 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 400 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 417 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 476 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 98 TIDNVKSKIQDKEGIPPDQQ 117 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 174 TIDNVKSKIQDKEGIPPDQQ 193 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 326 TIDNVKSKIQDKEGIPPDQQ 345 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 402 TIDNVKSKIQDKEGIPPDQQ 421 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 16/20 (80%), Positives = 17/20 (85%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI VK KIQD+EGIPPDQQ Sbjct: 478 TIDNVKSKIQDKEGIPPDQQ 497 Score = 70.5 bits (171), Expect = 1e-10 Identities = 35/41 (85%), Positives = 36/41 (87%), Gaps = 1/41 (2%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGM 122 PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGM Sbjct: 493 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533 >gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712] Length = 229 Score = 102 bits (255), Expect(2) = 6e-25 Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96 Score = 102 bits (255), Expect(2) = 6e-25 Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS Sbjct: 113 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172 Score = 36.2 bits (82), Expect(2) = 6e-25 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI +VK KIQD+EGIPPDQQ Sbjct: 98 TIDMVKSKIQDKEGIPPDQQ 117 Score = 36.2 bits (82), Expect(2) = 6e-25 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI +VK KIQD+EGIPPDQQ Sbjct: 174 TIDMVKSKIQDKEGIPPDQQ 193 Score = 68.2 bits (165), Expect = 7e-10 Identities = 34/40 (85%), Positives = 34/40 (85%), Gaps = 1/40 (2%) Frame = +3 Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119 PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GG Sbjct: 189 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228 Score = 39.3 bits (90), Expect(2) = 4e-06 Identities = 19/20 (95%), Positives = 19/20 (95%) Frame = +3 Query: 120 MQIFAKTLTGKTITLEVESS 179 MQIF KTLTGKTITLEVESS Sbjct: 1 MQIFVKTLTGKTITLEVESS 20 Score = 36.2 bits (82), Expect(2) = 4e-06 Identities = 16/20 (80%), Positives = 18/20 (90%) Frame = +1 Query: 181 TIGIVKVKIQDEEGIPPDQQ 240 TI +VK KIQD+EGIPPDQQ Sbjct: 22 TIDMVKSKIQDKEGIPPDQQ 41