BLASTX nr result
ID: Coptis25_contig00035421
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00035421
(241 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arab... 104 3e-25
gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03] 104 5e-25
gb|ABC94632.1| ubiquitin C [Ictalurus punctatus] 101 5e-25
gb|ABI53722.1| polyubiquitin [Pyropia yezoensis] 103 6e-25
gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712] 102 6e-25
>ref|XP_002873083.1| hypothetical protein ARALYDRAFT_487095 [Arabidopsis lyrata subsp.
lyrata] gi|297318920|gb|EFH49342.1| hypothetical protein
ARALYDRAFT_487095 [Arabidopsis lyrata subsp. lyrata]
Length = 306
Score = 104 bits (260), Expect(2) = 3e-25
Identities = 54/60 (90%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTLTDY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 37 PPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96
Score = 35.4 bits (80), Expect(2) = 3e-25
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 98 TIDNVKAKIQDKEGIPPDQQ 117
Score = 102 bits (255), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172
Score = 102 bits (255), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248
Score = 35.4 bits (80), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 174 TIDNVKAKIQDKEGIPPDQQ 193
Score = 35.4 bits (80), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 250 TIDNVKAKIQDKEGIPPDQQ 269
Score = 68.2 bits (165), Expect = 7e-10
Identities = 34/40 (85%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GG
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 304
Score = 39.3 bits (90), Expect(2) = 6e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 120 MQIFAKTLTGKTITLEVESS 179
MQIF KTLTGKTITLEVESS
Sbjct: 1 MQIFVKTLTGKTITLEVESS 20
Score = 35.4 bits (80), Expect(2) = 6e-06
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 22 TIDNVKAKIQDKEGIPPDQQ 41
>gb|EEH20847.1| ubiquitin [Paracoccidioides brasiliensis Pb03]
Length = 305
Score = 104 bits (260), Expect(2) = 5e-25
Identities = 54/60 (90%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTLTDY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 37 PPDQQRLIFAGKQLEDGRTLTDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96
Score = 34.7 bits (78), Expect(2) = 5e-25
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 98 TIDNVKSKIQDKEGIPPDQQ 117
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 174 TIDNVKSKIQDKEGIPPDQQ 193
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 250 TIDNVKSKIQDKEGIPPDQQ 269
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GG
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 304
>gb|ABC94632.1| ubiquitin C [Ictalurus punctatus]
Length = 192
Score = 101 bits (251), Expect(2) = 5e-25
Identities = 52/60 (86%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVE S
Sbjct: 76 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 135
Score = 38.1 bits (87), Expect(2) = 5e-25
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TIG VK KIQD+EGIPPDQQ
Sbjct: 137 TIGNVKAKIQDKEGIPPDQQ 156
Score = 98.6 bits (244), Expect(2) = 3e-23
Identities = 51/59 (86%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
Frame = +3
Query: 6 PDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVE S
Sbjct: 1 PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 59
Score = 35.0 bits (79), Expect(2) = 3e-23
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 61 TIENVKAKIQDKEGIPPDQQ 80
Score = 68.6 bits (166), Expect = 5e-10
Identities = 34/40 (85%), Positives = 35/40 (87%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GG
Sbjct: 152 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 191
>gb|ABI53722.1| polyubiquitin [Pyropia yezoensis]
Length = 533
Score = 103 bits (256), Expect(2) = 6e-25
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 248
Score = 35.8 bits (81), Expect(2) = 6e-25
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK+KIQD+EGIPPDQQ
Sbjct: 250 TIDNVKLKIQDKEGIPPDQQ 269
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 37 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 265 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 324
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 341 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 400
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 53/60 (88%), Positives = 54/60 (90%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 417 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 476
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 98 TIDNVKSKIQDKEGIPPDQQ 117
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 174 TIDNVKSKIQDKEGIPPDQQ 193
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 326 TIDNVKSKIQDKEGIPPDQQ 345
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 402 TIDNVKSKIQDKEGIPPDQQ 421
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI VK KIQD+EGIPPDQQ
Sbjct: 478 TIDNVKSKIQDKEGIPPDQQ 497
Score = 70.5 bits (171), Expect = 1e-10
Identities = 35/41 (85%), Positives = 36/41 (87%), Gaps = 1/41 (2%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGM 122
PPDQQRLIF GKQ EDGRTL+DY IQKESTLH VLRL GGM
Sbjct: 493 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGM 533
>gb|EKX44830.1| ubiquitin [Guillardia theta CCMP2712]
Length = 229
Score = 102 bits (255), Expect(2) = 6e-25
Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 37 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 96
Score = 102 bits (255), Expect(2) = 6e-25
Identities = 53/60 (88%), Positives = 53/60 (88%), Gaps = 1/60 (1%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGGMQIFAKTLTGKTITLEVESS 179
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GGMQIF KTLTGKTITLEVESS
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESS 172
Score = 36.2 bits (82), Expect(2) = 6e-25
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI +VK KIQD+EGIPPDQQ
Sbjct: 98 TIDMVKSKIQDKEGIPPDQQ 117
Score = 36.2 bits (82), Expect(2) = 6e-25
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI +VK KIQD+EGIPPDQQ
Sbjct: 174 TIDMVKSKIQDKEGIPPDQQ 193
Score = 68.2 bits (165), Expect = 7e-10
Identities = 34/40 (85%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Frame = +3
Query: 3 PPDQQRLIFIGKQFEDGRTLTDYTIQKESTLH-VLRLHGG 119
PPDQQRLIF GKQ EDGRTL DY IQKESTLH VLRL GG
Sbjct: 189 PPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 228
Score = 39.3 bits (90), Expect(2) = 4e-06
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 120 MQIFAKTLTGKTITLEVESS 179
MQIF KTLTGKTITLEVESS
Sbjct: 1 MQIFVKTLTGKTITLEVESS 20
Score = 36.2 bits (82), Expect(2) = 4e-06
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +1
Query: 181 TIGIVKVKIQDEEGIPPDQQ 240
TI +VK KIQD+EGIPPDQQ
Sbjct: 22 TIDMVKSKIQDKEGIPPDQQ 41