BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035404
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a...   168   5e-40
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a...   167   8e-40
ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis...   165   4e-39
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl...   161   6e-38
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a...   161   6e-38

>ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
          Length = 1671

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/117 (71%), Positives = 96/117 (82%)
 Frame = -3

Query: 351 EVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAPTVHLVNQQFQVIK 172
           EVARRRNTIAVLDTG+GKT+IAVML++EVG  +K    KKLIIFLAPTVHLVNQQF+ IK
Sbjct: 75  EVARRRNTIAVLDTGSGKTLIAVMLMKEVGQAIKTSGVKKLIIFLAPTVHLVNQQFKNIK 134

Query: 171 SHTDLNVEEYFGEKGVDVWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCL 1
             TD  VEEY+G KGVD W    WE E + NDVLVMTPQILLDALRKAFL ++++CL
Sbjct: 135 FLTDFQVEEYYGAKGVDTWTLKTWEKEISNNDVLVMTPQILLDALRKAFLRMEMICL 191


>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
          Length = 1648

 Score =  167 bits (423), Expect = 8e-40
 Identities = 84/117 (71%), Positives = 95/117 (81%)
 Frame = -3

Query: 351 EVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAPTVHLVNQQFQVIK 172
           EVA+RRNTIAVLDTG GKTMIA+MLI+E+G  +K    K  IIFLAPTVHLVNQQF+VIK
Sbjct: 55  EVAKRRNTIAVLDTGTGKTMIALMLIREIGQAVKADGRKLFIIFLAPTVHLVNQQFKVIK 114

Query: 171 SHTDLNVEEYFGEKGVDVWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCL 1
             T   VEEY+G KGVD W +  WE E +E+DVLVMTPQILLDALRKAFLSL+ VCL
Sbjct: 115 DSTGFEVEEYYGAKGVDEWSAKSWEKEISEHDVLVMTPQILLDALRKAFLSLETVCL 171


>ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
           gi|223544646|gb|EEF46162.1| Ribonuclease III, putative
           [Ricinus communis]
          Length = 1660

 Score =  165 bits (417), Expect = 4e-39
 Identities = 82/117 (70%), Positives = 97/117 (82%)
 Frame = -3

Query: 351 EVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAPTVHLVNQQFQVIK 172
           EVA +RNTIAVL+TGAGKTMIAVMLI+E+G  +K    KKLIIFLAPTVHLVNQQ++VIK
Sbjct: 71  EVAMKRNTIAVLETGAGKTMIAVMLIREIGQAIKSNDFKKLIIFLAPTVHLVNQQYEVIK 130

Query: 171 SHTDLNVEEYFGEKGVDVWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCL 1
            +T+  V EY+G KG+D W    WE E NE+DVLVMTPQILLDALRKAFL+L++V L
Sbjct: 131 DNTNFKVGEYYGAKGIDGWSMKVWEKEINEHDVLVMTPQILLDALRKAFLNLEMVSL 187


>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
           3a-like [Cucumis sativus]
          Length = 1639

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/117 (68%), Positives = 91/117 (77%)
 Frame = -3

Query: 351 EVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAPTVHLVNQQFQVIK 172
           EV  RRNTIAVL TG+GKTMIAVMLI+E+G  +K   +KKLIIFLAPTVHLV+QQF VIK
Sbjct: 48  EVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLVHQQFNVIK 107

Query: 171 SHTDLNVEEYFGEKGVDVWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCL 1
            HTD  V EY+G  GVD W+   WE E +E DVLVMTPQILLDALRKA+  L  +CL
Sbjct: 108 DHTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTICL 164


>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
          Length = 1359

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/117 (68%), Positives = 91/117 (77%)
 Frame = -3

Query: 351 EVARRRNTIAVLDTGAGKTMIAVMLIQEVGMVLKERKEKKLIIFLAPTVHLVNQQFQVIK 172
           EV  RRNTIAVL TG+GKTMIAVMLI+E+G  +K   +KKLIIFLAPTVHLV+QQF VIK
Sbjct: 48  EVGMRRNTIAVLGTGSGKTMIAVMLIKEIGKAMKSSSDKKLIIFLAPTVHLVHQQFNVIK 107

Query: 171 SHTDLNVEEYFGEKGVDVWDSMRWETEANENDVLVMTPQILLDALRKAFLSLKLVCL 1
            HTD  V EY+G  GVD W+   WE E +E DVLVMTPQILLDALRKA+  L  +CL
Sbjct: 108 DHTDFEVAEYYGAMGVDDWNMNCWEKETSERDVLVMTPQILLDALRKAYFRLGTICL 164