BLASTX nr result

ID: Coptis25_contig00035402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035402
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]    62   6e-08
emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]    58   7e-07
sp|Q851V5.1|Y3216_ORYSJ RecName: Full=Putative B3 domain-contain...    57   2e-06
ref|XP_003549416.1| PREDICTED: B3 domain-containing protein Os01...    57   2e-06
ref|NP_001050679.2| Os03g0621600 [Oryza sativa Japonica Group] g...    57   2e-06

>emb|CAN76392.1| hypothetical protein VITISV_011465 [Vitis vinifera]
          Length = 765

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/57 (47%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -3

Query: 451 IEVKKVE-DNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEERS 284
           +E+K+VE D F  NGWQ FV+ HS+  G+FLVF+Y   + F+V ++  +GC K+E S
Sbjct: 519 VELKEVEKDVFIKNGWQEFVRGHSVEQGDFLVFRYHGKALFDVSIFGRNGCRKDESS 575



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
 Frame = -3

Query: 424 FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKE----ERSYENMYKSSY 257
           FF  GW  FV+ + L LG+FLVF Y  NS FEV++Y    CEKE      S +  +    
Sbjct: 132 FFEKGWGKFVQDNFLELGDFLVFHYVGNSKFEVIIYGKHCCEKELLAATASNDEPHSKG- 190

Query: 256 FVKEREEKNDAEEAGRGASKT 194
              ER+E    E   RG S T
Sbjct: 191 --DERQENAKRENGERGESGT 209


>emb|CAN82365.1| hypothetical protein VITISV_027616 [Vitis vinifera]
          Length = 844

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
 Frame = -3

Query: 454 RIEVKKV-EDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKE--ERS 284
           ++E+ K+ +D +F  GWQ FV  + + + +FLVF+YD    F+  L+ ++GCEK+  E  
Sbjct: 516 QVELSKIGKDVYFQKGWQKFVTDNFVEMEDFLVFRYDGGYIFDFKLFRNTGCEKKGSEEI 575

Query: 283 YENMYKSSYFVKE----REEKNDAEE 218
              +YK  + V E     EEK++ EE
Sbjct: 576 NVGIYKRCFCVNEEKDVEEEKSNEEE 601



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
 Frame = -3

Query: 451 IEVKKVEDN-FFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEERSYEN 275
           +EV  +  N +F NGWQ F+  +S+  G+FLVF+Y  N  F+  L   + CEK++    +
Sbjct: 148 VEVGPIGKNVYFLNGWQQFLTENSVEEGDFLVFRYAGNCIFDFKLLGRTECEKKDTKVVD 207

Query: 274 M--YKSSYFVKERE-EKNDAEE 218
           M  YK  + VKE++ E+ + EE
Sbjct: 208 MDIYKKDFCVKEKDVEEAEGEE 229


>sp|Q851V5.1|Y3216_ORYSJ RecName: Full=Putative B3 domain-containing protein Os03g0621600
           gi|28201553|gb|AAO34491.1| putative auxin response
           factor [Oryza sativa Japonica Group]
           gi|108709878|gb|ABF97673.1| B3 DNA binding domain
           containing protein [Oryza sativa Japonica Group]
          Length = 1029

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -3

Query: 442 KKVEDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEER-SYENM-- 272
           KK+      +GW+ FV +H L++G+FLVFKY+ +   +VL+++ SGCEK    S EN   
Sbjct: 499 KKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAID 558

Query: 271 YKSSYFVKEREEKNDAEEAGRGASKTV*KNYSRVGKKIGKS 149
           +    + +  +      +  +G    + K+ S  G KIG +
Sbjct: 559 HVGQGWKEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNT 599


>ref|XP_003549416.1| PREDICTED: B3 domain-containing protein Os01g0723500-like [Glycine
           max]
          Length = 561

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 29/80 (36%), Positives = 41/80 (51%)
 Frame = -3

Query: 445 VKKVEDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEERSYENMYK 266
           +K+  D F H+GW  FV  H L  GE LVF+Y+ +  F V +++   CEKE   +    +
Sbjct: 52  IKQENDLFLHHGWSTFVVDHQLECGELLVFRYEGHLHFTVQVFDKDACEKEAAFHSECSQ 111

Query: 265 SSYFVKEREEKNDAEEAGRG 206
           SS  +   E  N   E G G
Sbjct: 112 SSKIMSTNE--NQELELGVG 129


>ref|NP_001050679.2| Os03g0621600 [Oryza sativa Japonica Group]
           gi|255674715|dbj|BAF12593.2| Os03g0621600 [Oryza sativa
           Japonica Group]
          Length = 973

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)
 Frame = -3

Query: 442 KKVEDNFFHNGWQGFVKSHSLSLGEFLVFKYDDNSTFEVLLYEHSGCEKEER-SYENM-- 272
           KK+      +GW+ FV +H L++G+FLVFKY+ +   +VL+++ SGCEK    S EN   
Sbjct: 443 KKLNILVLGSGWESFVNAHDLNMGDFLVFKYNGDFLLQVLIFDPSGCEKSTSCSMENAID 502

Query: 271 YKSSYFVKEREEKNDAEEAGRGASKTV*KNYSRVGKKIGKS 149
           +    + +  +      +  +G    + K+ S  G KIG +
Sbjct: 503 HVGQGWKEHNDISTSYHDQPKGNKHWMQKDSSSKGNKIGNT 543


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