BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035397
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38215.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...   133   2e-29
ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   125   4e-27
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...   125   5e-27
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...   125   5e-27

>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/137 (46%), Positives = 97/137 (70%)
 Frame = -2

Query: 414 DEISRVHNIRPTIEHYTGMVYLLSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGE 235
           +++S ++N+RP +EHY  MV LL RA L++EA E I+ MP++PD FV GAL G  +IHG+
Sbjct: 431 EDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGK 490

Query: 234 KCLLEDEDEDVRKELASLEPKDSGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGC 55
             L     E V K++  +EP+  GAY+LMSNIY+S ++W +++K+R+TM+E  ++K  GC
Sbjct: 491 VEL----GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGC 546

Query: 54  SSIEVDQNVDEFSAGGR 4
           SSIE+D  + EF  G +
Sbjct: 547 SSIELDGVIHEFQKGDK 563


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/137 (46%), Positives = 97/137 (70%)
 Frame = -2

Query: 414 DEISRVHNIRPTIEHYTGMVYLLSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGE 235
           +++S ++N+RP +EHY  MV LL RA L++EA E I+ MP++PD FV GAL G  +IHG+
Sbjct: 453 EDMSTIYNLRPQLEHYGCMVDLLGRAGLINEAEEFIRNMPIEPDAFVLGALLGACKIHGK 512

Query: 234 KCLLEDEDEDVRKELASLEPKDSGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGC 55
             L     E V K++  +EP+  GAY+LMSNIY+S ++W +++K+R+TM+E  ++K  GC
Sbjct: 513 VEL----GESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTPGC 568

Query: 54  SSIEVDQNVDEFSAGGR 4
           SSIE+D  + EF  G +
Sbjct: 569 SSIELDGVIHEFQKGDK 585


>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  125 bits (314), Expect = 4e-27
 Identities = 64/135 (47%), Positives = 90/135 (66%)
 Frame = -2

Query: 414 DEISRVHNIRPTIEHYTGMVYLLSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGE 235
           + + RV  + P IEHY  MV LL RA  LDEA +++K MPM+ +  VWGAL GG R+H +
Sbjct: 372 NSMERVFTLTPEIEHYGCMVDLLGRAGFLDEAHQLVKSMPMEANAIVWGALLGGCRLHRD 431

Query: 234 KCLLEDEDEDVRKELASLEPKDSGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGC 55
             L+E     V K+L +LEP +SG Y+L+SNIY+++ +W+++ K+R  M E G+KK+ G 
Sbjct: 432 TQLVEG----VLKQLIALEPSNSGNYVLLSNIYSASHKWEDAAKIRSIMSERGIKKVPGY 487

Query: 54  SSIEVDQNVDEFSAG 10
           S IEVD  V EF  G
Sbjct: 488 SWIEVDGVVHEFLVG 502


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/137 (46%), Positives = 90/137 (65%)
 Frame = -2

Query: 414 DEISRVHNIRPTIEHYTGMVYLLSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGE 235
           + + RV ++ P+IEHY  MV LL RA LL+EA ++I  MPMKP+  VWGAL GG ++H +
Sbjct: 441 NNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKD 500

Query: 234 KCLLEDEDEDVRKELASLEPKDSGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGC 55
             L     E V K+L  LEP +SG Y+ +SNIY+ N +W+ + K+R TM+E  ++KI  C
Sbjct: 501 THLA----EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRAC 556

Query: 54  SSIEVDQNVDEFSAGGR 4
           S IE+D  V EF  G +
Sbjct: 557 SWIEIDGIVHEFLVGDK 573


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  125 bits (313), Expect = 5e-27
 Identities = 64/137 (46%), Positives = 90/137 (65%)
 Frame = -2

Query: 414 DEISRVHNIRPTIEHYTGMVYLLSRANLLDEAREVIKEMPMKPDLFVWGALHGGSRIHGE 235
           + + RV ++ P+IEHY  MV LL RA LL+EA ++I  MPMKP+  VWGAL GG ++H +
Sbjct: 441 NNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKD 500

Query: 234 KCLLEDEDEDVRKELASLEPKDSGAYILMSNIYASNDQWDNSMKMRRTMEEMGVKKILGC 55
             L     E V K+L  LEP +SG Y+ +SNIY+ N +W+ + K+R TM+E  ++KI  C
Sbjct: 501 THLA----EQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTMKEQQIQKIRAC 556

Query: 54  SSIEVDQNVDEFSAGGR 4
           S IE+D  V EF  G +
Sbjct: 557 SWIEIDGIVHEFLVGDK 573