BLASTX nr result

ID: Coptis25_contig00035393 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035393
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518432.1| conserved hypothetical protein [Ricinus comm...   233   2e-59
ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|2...   232   2e-59
emb|CBI28840.3| unnamed protein product [Vitis vinifera]              232   3e-59
ref|XP_002301612.1| predicted protein [Populus trichocarpa] gi|2...   231   3e-59
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...   230   8e-59

>ref|XP_002518432.1| conserved hypothetical protein [Ricinus communis]
           gi|223542277|gb|EEF43819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 773

 Score =  233 bits (593), Expect = 2e-59
 Identities = 113/146 (77%), Positives = 121/146 (82%)
 Frame = -3

Query: 440 MDPGSLGFNTGEPQIQFYFLLGLVYAVVTPILLPFVVVFFCLAYVVFRHQIINVYNQEYE 261
           M PGSLGFNTGEP+IQFYFLLGLVYA VTP LLPF++VFF  AYVVFRHQIINVY+QEYE
Sbjct: 557 MHPGSLGFNTGEPRIQFYFLLGLVYATVTPTLLPFIIVFFAFAYVVFRHQIINVYDQEYE 616

Query: 260 SAAAFWPDVHGRXXXXXXXXXXXXXXXXSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEP 81
           S AAFWPDVHGR                STK+AAQSTPFLIVLPVLTIWFHRFCK R+EP
Sbjct: 617 SGAAFWPDVHGRVITALIISQVLMIGLLSTKRAAQSTPFLIVLPVLTIWFHRFCKGRYEP 676

Query: 80  AFVRYPLKEAMMKDTLERTRERNLNL 3
           AFV+YPL+EAMMKDTLER RE NLNL
Sbjct: 677 AFVKYPLQEAMMKDTLERAREPNLNL 702


>ref|XP_002321139.1| predicted protein [Populus trichocarpa] gi|222861912|gb|EEE99454.1|
           predicted protein [Populus trichocarpa]
          Length = 768

 Score =  232 bits (592), Expect = 2e-59
 Identities = 112/146 (76%), Positives = 122/146 (83%)
 Frame = -3

Query: 440 MDPGSLGFNTGEPQIQFYFLLGLVYAVVTPILLPFVVVFFCLAYVVFRHQIINVYNQEYE 261
           MDPG+LGFNTGEPQIQ YFLLGLVYAVV+PILLPF++VFF LA+VV+RHQIINVYNQEYE
Sbjct: 555 MDPGTLGFNTGEPQIQLYFLLGLVYAVVSPILLPFIIVFFALAFVVYRHQIINVYNQEYE 614

Query: 260 SAAAFWPDVHGRXXXXXXXXXXXXXXXXSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEP 81
           SAAAFWPDVHGR                STK+AAQSTP LI LP+LTIWFH FCK R+EP
Sbjct: 615 SAAAFWPDVHGRIIVAVIVSQLLLMGLLSTKEAAQSTPLLITLPILTIWFHLFCKGRYEP 674

Query: 80  AFVRYPLKEAMMKDTLERTRERNLNL 3
           AFVRYPL+EAMMKDTLER RE NLNL
Sbjct: 675 AFVRYPLQEAMMKDTLERAREPNLNL 700


>emb|CBI28840.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  232 bits (591), Expect = 3e-59
 Identities = 116/146 (79%), Positives = 120/146 (82%)
 Frame = -3

Query: 440 MDPGSLGFNTGEPQIQFYFLLGLVYAVVTPILLPFVVVFFCLAYVVFRHQIINVYNQEYE 261
           MDPGSL FNTGEPQIQ YFLLGLVYAVVTPILLPF++VFF LAYVVFRHQIINVYNQEYE
Sbjct: 555 MDPGSLSFNTGEPQIQLYFLLGLVYAVVTPILLPFIIVFFGLAYVVFRHQIINVYNQEYE 614

Query: 260 SAAAFWPDVHGRXXXXXXXXXXXXXXXXSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEP 81
           SAAAFWPDVH R                STKQAAQSTP LI LPVLTIWFH FCK R+EP
Sbjct: 615 SAAAFWPDVHMRIIVALVVSQLLLMGLLSTKQAAQSTPLLIALPVLTIWFHFFCKGRYEP 674

Query: 80  AFVRYPLKEAMMKDTLERTRERNLNL 3
           AFVRYPL+EAMMKDTLER RE NLNL
Sbjct: 675 AFVRYPLQEAMMKDTLERVREPNLNL 700


>ref|XP_002301612.1| predicted protein [Populus trichocarpa] gi|222843338|gb|EEE80885.1|
           predicted protein [Populus trichocarpa]
          Length = 763

 Score =  231 bits (590), Expect = 3e-59
 Identities = 112/146 (76%), Positives = 122/146 (83%)
 Frame = -3

Query: 440 MDPGSLGFNTGEPQIQFYFLLGLVYAVVTPILLPFVVVFFCLAYVVFRHQIINVYNQEYE 261
           MDPG+LGFNTGEPQIQ YFLLGLVYAVV+PILLPF++VFF LA+VV+RHQIINVYNQEYE
Sbjct: 551 MDPGTLGFNTGEPQIQLYFLLGLVYAVVSPILLPFIIVFFALAFVVYRHQIINVYNQEYE 610

Query: 260 SAAAFWPDVHGRXXXXXXXXXXXXXXXXSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEP 81
           SAAAFWPDVHGR                STK+AAQSTP LI LPVLTIWFH FCK R+EP
Sbjct: 611 SAAAFWPDVHGRIIVAVIVSQLLLMGLLSTKEAAQSTPLLITLPVLTIWFHLFCKGRYEP 670

Query: 80  AFVRYPLKEAMMKDTLERTRERNLNL 3
           AFVRYPL+EAMMKDTLER +E NLNL
Sbjct: 671 AFVRYPLQEAMMKDTLERAKEPNLNL 696


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score =  230 bits (587), Expect = 8e-59
 Identities = 111/146 (76%), Positives = 121/146 (82%)
 Frame = -3

Query: 440 MDPGSLGFNTGEPQIQFYFLLGLVYAVVTPILLPFVVVFFCLAYVVFRHQIINVYNQEYE 261
           MDPGS+GFNTGEP+IQ YFLLGLVYAVVTP+LLPF++VFFCLAYVVFRHQIINVYNQEYE
Sbjct: 557 MDPGSIGFNTGEPRIQLYFLLGLVYAVVTPVLLPFIIVFFCLAYVVFRHQIINVYNQEYE 616

Query: 260 SAAAFWPDVHGRXXXXXXXXXXXXXXXXSTKQAAQSTPFLIVLPVLTIWFHRFCKSRFEP 81
           S AAFWPDVHGR                STKQAAQSTPFLI LP+LTI FH +CK RFEP
Sbjct: 617 SGAAFWPDVHGRIIGALIISQLLLMGLLSTKQAAQSTPFLIALPILTISFHYYCKGRFEP 676

Query: 80  AFVRYPLKEAMMKDTLERTRERNLNL 3
           AF+RYPL+EA MKDTLER RE +LNL
Sbjct: 677 AFIRYPLQEAKMKDTLERAREPHLNL 702


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