BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035365
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298351.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
ref|XP_002313433.1| predicted protein [Populus trichocarpa] gi|2...    82   3e-14
ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like ...    82   4e-14
ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana] ...    81   8e-14
ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Viti...    81   1e-13

>ref|XP_002298351.1| predicted protein [Populus trichocarpa] gi|222845609|gb|EEE83156.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 44/100 (44%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
 Frame = -2

Query: 391 KAGNGNNDPGAYIPVKSTQHVCTPP-------HEMWFSWLVPLIFVADIVAFVWTMYVND 233
           + G GN+     +  +   +V +PP        + W  WLVPL  V++I  F+  MYVND
Sbjct: 4   REGAGNDIVEIKVHPRRENNVGSPPPYQNKAVFKKWVPWLVPLFVVSNIAVFIAVMYVND 63

Query: 232 CPAISKDCFLPSLGRFSFQPLSENYLVGPSAAT*VPSSPL 113
           CP  S  C  PSLGRFSFQPL EN L+GPS++T V    L
Sbjct: 64  CPTNSGSCVAPSLGRFSFQPLKENPLLGPSSSTLVKMGAL 103


>ref|XP_002313433.1| predicted protein [Populus trichocarpa] gi|222849841|gb|EEE87388.1|
           predicted protein [Populus trichocarpa]
          Length = 292

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 36/58 (62%), Positives = 43/58 (74%)
 Frame = -2

Query: 307 WFSWLVPLIFVADIVAFVWTMYVNDCPAISKDCFLPSLGRFSFQPLSENYLVGPSAAT 134
           W  WLVPL  VA++  F+  MYVNDCP+ S  C  PSLGRFSFQPL EN L+GPS++T
Sbjct: 3   WVPWLVPLFVVANVAVFIAVMYVNDCPSNSGSCVAPSLGRFSFQPLKENPLLGPSSST 60


>ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
          Length = 385

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/74 (51%), Positives = 48/74 (64%)
 Frame = -2

Query: 355 IPVKSTQHVCTPPHEMWFSWLVPLIFVADIVAFVWTMYVNDCPAISKDCFLPSLGRFSFQ 176
           +P++  +      +  WFSWL+PL  VA+IV FV TMYVN+CP  S  C    LGRFSFQ
Sbjct: 34  VPIQYPREEEVKHYRKWFSWLIPLFVVANIVMFVITMYVNNCPRNSVSCIASFLGRFSFQ 93

Query: 175 PLSENYLVGPSAAT 134
           P  EN L+GPS+ T
Sbjct: 94  PFKENPLLGPSSLT 107


>ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
           gi|5903047|gb|AAD55606.1|AC008016_16 F6D8.20
           [Arabidopsis thaliana] gi|332194705|gb|AEE32826.1|
           RHOMBOID-like protein 5 [Arabidopsis thaliana]
          Length = 309

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/97 (48%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
 Frame = -2

Query: 421 MGMWPPSTPPKAGNGNNDPGAYIPVKSTQHVCTPPHEMWFSWLVPLIFVADIVAFVWTMY 242
           MG  PP  PP   NG   P       +  H   P    W +WLVPLI  A+ V F  TMY
Sbjct: 1   MGKRPP-IPPDIENGPPPP-------ARPHFRPPIPVPWVAWLVPLILAANFVTFATTMY 52

Query: 241 VNDCPAISKDCFL-PSLGRFSFQPLSENYLVGPSAAT 134
           VNDCPA S +C L   LGR SFQP+ EN L+GPS  T
Sbjct: 53  VNDCPARSDECLLFDVLGRLSFQPIKENMLLGPSIPT 89


>ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 391

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 38/80 (47%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
 Frame = -2

Query: 367 PGAYIPVKSTQHVCTP--PHEMWFSWLVPLIFVADIVAFVWTMYVNDCPAISKDCFLPSL 194
           P A  P +  QH+ +   P + WF W+VP   VA+I  F+ TM++N+CP  S  C    L
Sbjct: 34  PAASAPPRQQQHLFSEFRPFKRWFPWMVPTFVVANIAMFLITMFINNCPKNSVSCVADFL 93

Query: 193 GRFSFQPLSENYLVGPSAAT 134
           GRFSFQPL EN L+GPS++T
Sbjct: 94  GRFSFQPLKENPLLGPSSST 113