BLASTX nr result

ID: Coptis25_contig00035352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00035352
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Popu...   131   5e-29
ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267...   128   5e-28
emb|CBI37340.3| unnamed protein product [Vitis vinifera]              128   5e-28
emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]   126   2e-27
ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811...   115   3e-24

>ref|XP_002303042.1| hypothetical protein POPTRDRAFT_756271 [Populus trichocarpa]
            gi|222844768|gb|EEE82315.1| hypothetical protein
            POPTRDRAFT_756271 [Populus trichocarpa]
          Length = 2006

 Score =  131 bits (330), Expect = 5e-29
 Identities = 73/162 (45%), Positives = 96/162 (59%), Gaps = 4/162 (2%)
 Frame = +3

Query: 6    TDLSSGDTNSFQDQQNIVHEDLHISKYLNVECVRGFQKNLPTDCTEIPAT-LENAEARHV 182
            TD SSGDTNSFQD Q+I+H    I K + VE    F++ LP D  E      +  +A+H+
Sbjct: 925  TDASSGDTNSFQDDQSILHGGSQIQKSVEVESAAHFERQLPYDYAETSTKPKKKKKAKHL 984

Query: 183  DSAYECGWQRDTIGPKEQRDHSEQRSEYHQHESNGYSGPLGQHVVKKPSILEKLSDTFTQ 362
             SAYE GWQ D+ G  EQRD+ ++RSE H  +SNG SG  GQH  KKP I ++L D    
Sbjct: 985  GSAYEQGWQLDSTGHNEQRDNFKKRSESHHLDSNGTSGLYGQHTTKKPKISKQLLDNTFD 1044

Query: 363  GIIARTG---CPLASETSNASNLNKSMKKVSCRHRRKKTKSL 479
             +   TG    P AS+ SN SN N+ +K +  R R +K KS+
Sbjct: 1045 NMAQMTGSIPSPAASQMSNMSNTNRFIKLIGGRERGRKNKSM 1086


>ref|XP_002269196.2| PREDICTED: uncharacterized protein LOC100267035 [Vitis vinifera]
          Length = 2022

 Score =  128 bits (321), Expect = 5e-28
 Identities = 73/162 (45%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
 Frame = +3

Query: 6    TDLSSGDTNSFQDQQNIVHEDLHISKYLNVECVRGFQKNLPTDCTEIPAT-LENAEARHV 182
            TD SSGDT+SFQD Q+ +H    I K L VE V  F+K LP D  E+     +  +A+H+
Sbjct: 940  TDASSGDTSSFQDDQSTLHGGSQIQKSLEVESVVDFEKQLPFDSAEVSTKPKKKKKAKHL 999

Query: 183  DSAYECGWQRDTIGPKEQRDHSEQRSEYHQHESNGYSGPLGQHVVKKPSILEKLSDTFTQ 362
             S YE  WQ D+    EQRDHS++RSE H  ESNG SG  GQH  KKP I++   D    
Sbjct: 1000 GSTYEQRWQLDSTVHNEQRDHSKKRSEGHHFESNGSSGLFGQHNSKKPKIIKHSVDNTFD 1059

Query: 363  GIIARTG---CPLASETSNASNLNKSMKKVSCRHRRKKTKSL 479
             I   +G    P+AS+ SN SN NK ++ +  R R +K K L
Sbjct: 1060 NITPMSGSIPSPVASQMSNMSNPNKIIRMIGVRDRGRKAKGL 1101


>emb|CBI37340.3| unnamed protein product [Vitis vinifera]
          Length = 1688

 Score =  128 bits (321), Expect = 5e-28
 Identities = 73/162 (45%), Positives = 94/162 (58%), Gaps = 4/162 (2%)
 Frame = +3

Query: 6    TDLSSGDTNSFQDQQNIVHEDLHISKYLNVECVRGFQKNLPTDCTEIPAT-LENAEARHV 182
            TD SSGDT+SFQD Q+ +H    I K L VE V  F+K LP D  E+     +  +A+H+
Sbjct: 865  TDASSGDTSSFQDDQSTLHGGSQIQKSLEVESVVDFEKQLPFDSAEVSTKPKKKKKAKHL 924

Query: 183  DSAYECGWQRDTIGPKEQRDHSEQRSEYHQHESNGYSGPLGQHVVKKPSILEKLSDTFTQ 362
             S YE  WQ D+    EQRDHS++RSE H  ESNG SG  GQH  KKP I++   D    
Sbjct: 925  GSTYEQRWQLDSTVHNEQRDHSKKRSEGHHFESNGSSGLFGQHNSKKPKIIKHSVDNTFD 984

Query: 363  GIIARTG---CPLASETSNASNLNKSMKKVSCRHRRKKTKSL 479
             I   +G    P+AS+ SN SN NK ++ +  R R +K K L
Sbjct: 985  NITPMSGSIPSPVASQMSNMSNPNKIIRMIGVRDRGRKAKGL 1026


>emb|CAN78796.1| hypothetical protein VITISV_008076 [Vitis vinifera]
          Length = 2257

 Score =  126 bits (317), Expect = 2e-27
 Identities = 73/162 (45%), Positives = 93/162 (57%), Gaps = 4/162 (2%)
 Frame = +3

Query: 6    TDLSSGDTNSFQDQQNIVHEDLHISKYLNVECVRGFQKNLPTDCTEIPAT-LENAEARHV 182
            TD SSGDT+SFQD Q+ +H    I K L VE V  F+K LP D  E+     +  +A+H 
Sbjct: 926  TDASSGDTSSFQDDQSTLHGGSQIQKSLEVESVVDFEKXLPFDSAEVSTKPKKKKKAKHP 985

Query: 183  DSAYECGWQRDTIGPKEQRDHSEQRSEYHQHESNGYSGPLGQHVVKKPSILEKLSDTFTQ 362
             S YE  WQ D+    EQRDHS++RSE H  ESNG SG  GQH  KKP I++   D    
Sbjct: 986  GSTYEQRWQLDSTVHNEQRDHSKKRSEGHHFESNGSSGLFGQHNSKKPKIIKHSVDNTFD 1045

Query: 363  GIIARTG---CPLASETSNASNLNKSMKKVSCRHRRKKTKSL 479
             I   +G    P+AS+ SN SN NK ++ +  R R +K K L
Sbjct: 1046 NITPMSGSIPSPVASQMSNMSNPNKIIRMIGVRDRGRKAKGL 1087


>ref|XP_003548677.1| PREDICTED: uncharacterized protein LOC100811365 [Glycine max]
          Length = 1979

 Score =  115 bits (289), Expect = 3e-24
 Identities = 67/161 (41%), Positives = 92/161 (57%), Gaps = 4/161 (2%)
 Frame = +3

Query: 9    DLSSGDTNSFQDQQNIVHEDLHISKYLNVECVRGFQKNLPTDCTE-IPATLENAEARHVD 185
            D SSGDTNSF D Q+ +H    I K   VE V  ++K L  DC E    T +  +A+ + 
Sbjct: 906  DASSGDTNSFHDDQSTLHVGPLIQKSTEVESVADYEKQLSQDCAETFVKTKKKKKAKTLG 965

Query: 186  SAYECGWQRDTIGPKEQRDHSEQRSEYHQHESNGYSGPLGQHVVKKPSILEKLSDTFTQG 365
            + Y+ GW+ D++   EQRD S++R E H  ESNG SG  GQ   KKP I+ +  D     
Sbjct: 966  TTYDPGWELDSVVSNEQRDQSKKRGESHHFESNGSSGFCGQPNSKKPKIMRQSLDNPLDN 1025

Query: 366  IIARTG---CPLASETSNASNLNKSMKKVSCRHRRKKTKSL 479
            I++ T     P+AS+ SN SN NK +K +S R R +K K+L
Sbjct: 1026 IVSMTNSIPSPVASQMSNMSNPNKFIKIISGRDRGRKAKAL 1066


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